Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04828 ATGGAGGTGAGTCAAGAAGATTATGGAGAATGTAAATCCTCTCATCCCCTCTTTTTCTCCAACAATGGTGATACTGTCTTCAAATTTGATCGGTCAGGCTTGTTCTTCTTCATTAGTGGTGTTCCTGGTCACTGTAACAGAGGGCAGAAGATGATCATCAAGGTTTTGGATATTGAGCCAACACCCCCACCCCAATCTGCAAATGACAGTGCACCAAAGTCACATTCAAAAAGTGGAGTTGCTGAACTGACTCCTACGAGGATAATAACAGCATCCACACTTGTTGTTATGTCATCCTTCTTCCTTCATCTTTATGTTTAA 321 0.4174 MEVSQEDYGECKSSHPLFFSNNGDTVFKFDRSGLFFFISGVPGHCNRGQKMIIKVLDIEPTPPPQSANDSAPKSHSKSGVAELTPTRIITASTLVVMSSFFLHLYV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04828 106 PANTHER BLUE COPPER PROTEIN 1 75 IPR039391 GO:0009055
Spst3g04828 106 SUPERFAMILY Cupredoxins 2 56 IPR008972 -
Spst3g04828 106 MobiDBLite consensus disorder prediction 59 80 - -
Spst3g04828 106 Gene3D - 1 59 IPR008972 -
Spst3g04828 106 Pfam Plastocyanin-like domain 1 49 IPR003245 GO:0009055
Spst3g04828 106 ProSiteProfiles Phytocyanin domain profile. 1 57 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04828 Spst-Chr3 99995304 99995624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04828 3 56 Phytocyanin Superfamily AT3G18590 64.815 1.17e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04828 - - var:108327897 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04828 3 99995304 99995624 Spst3g04828 3 99995304 99995624 ECH