Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04820 ATGGCTGGGGGGAGAAGGAGGAGACACCACTTCGGCAGAATCCATGCATTCACGTGTGGGAAAGCTTCCTTGAAGGAGGAGCATTCACTGATTGGAGGCCCTGGCTTCTCAAGGAAAGTATATTGCAATGATCCTGAAAGTGCCACTGCGAGTCTTCTCAATTATGGTGACAATTATGTCAGAACAACTAAGTATACATTGGCCACGTTCATTCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTTGCAAATTTCTACTTCCTCGTTTGTGCAATTTTGTCTTTCTTTCCGGTGTCTCCTTACTCTGGCGTCAGTAATGTTGTCCCTCTACTGGTTGTGGTTGCTGCAACAATGGTCAAAGAGTTCATTGAGGATTTTAGGAGGAAAAAACAGGATATAGAGATGAATAACAGAAAAGTTAAAGTACATCGTGGAGGTGGTGATTTTGCCTATTCTAAATGGAGGGATTTGAAAGTTGGAGATGTAGTGAGGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCGTCAAATTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAGACAAATCTGAAACTGAAACAAGCATTGGAAGGAACTTCAAAGTTGCAAGAAGACTCGTACTTTGAAAATTTCAGGTCGGTCATCTCATGTGAAGATCCAAATGCAAATTTGTACACATTTGTTGGTAGTATGGAGCTTGAGGATCAACAGTATCCTCTTTCACCTCAACAGCTTCTGCTCAGGGACTCTAAACTGAGGAACACGGATTTTGTTTATGGTGTTGTAATCTTTACTGGACATGATACAAAGGTTATGCAGAATGCAACAGATCCTCCATCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAGATTATCTACTGCCTCTTCTTTCTACTTATTGTGATTTCTTTCATCGGGTCCATATTGTTTGGGATTACAACAAATGATGACATTGAAAATGGACGAATGAAGAGATGGTACCTTAGACCAGATGATACCGAAATTTACTATGATCCTAATGAACCAGTAGCTGCTGCAATTCTGCATTTCTTGACAGCACTTATGTTGTATAGTTACTTGATTCCAATTTCCTTATATGTATCCATTGAAATTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGAGAAAATGTATTATGAAGAAACTGACAAGCCAGCGCGTGCTCGGACATCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAGACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGAAGAGTAGCTACAGAAGTTGAGAGAGCTCTGTCTAGGAGACATGAATCAGATTCAGGTCAAGAGTTGAAAGAAAACAAAAACATTGCAAAGGTTGGTGAATCAAAGTCATCCATTAAAGGGTTTAACTTTAAGGATGAAAGGATCATGAATGGAAATTGGATGAAAGAACCCAATGCCAATGTAATCCAGAACTTCCTAAGGCTGCTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGGAACTGGTAAAGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGGGAACTTGGATTTGAATTTTATGAAAGAACACATACAAATATTTCACTGCGTGAATTAGACCCCATAACAGGCCTCAAAACCCAAAGGTCCTACAAACTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAGAGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAAATTGTTGCTGCTTAGCAAAGGCGCTGACAGTGTTATGTTTGAACGAATTGCAAAGAATGGAAGGGAATTTGAAGAGATGACAAAGCAGCACATTAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTAGTGAGGAAGAGTACCATCGATTTAATAAAGAGTTTACTGAGGCCAAGAACTTAGTGAGTGCAGACCAGGAGCAGATTGTTGAGAACATAATACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGGATTAAGCTATGGGTTTTAACTGGTGATAAAATGGAGACAGCAATTAATATAGGATATGCTTGTAGTTTACTCAGACAAGGAATGAAACAAATTATAATTAGCTCAGATACTCCAGAAAACAAATCATTGGAGAAAATGGAGGACAAGTCTGCTGCTGAAGCGGCAATGAAGTCAAGTGTTATTCGTCAATTAAGGGAGGCAAAGGCATTACTTTCTTCATCACATGAAAACTATGAAGCCTTAGCCCTGATCATTGATGGGAAGTCTCTTACTTATGCCCTAGAAGATGATGTAAAAGATTTATTTCTTGAACTTGCAATTGGATGTGCATCTGTTATCTGCTGTCGTTCATCTCCCAAGCAGAAAGCACTTGTTACAAGACTGGTGAAGACGAGAACCGGTAGTACAACCCTTGCTATTGGAGATGGAGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTGGAAGGAATGCAGGCAGTTATGTCAAGTGATATCGCAATAGCGCAATTCCGGTTTCTTGAGCGCTTACTTCTTGTGCACGGACATTGGTGTTACAGAAGGATCTCATCAATGATCTGCTACTTCTTTTACAAGAATCTTGCCTTCGGCTTCACTCTGTTCTTCTTTGAGATGTATGCCTCATTCTCCGGGCAAGCTGCGTACAACGATTGGTTCATGTCACTATATAACGTATTCTTCACTTCACTTCCTGTAATTGCATTGGGAGTGTTTGATCAAGATGTCTCTTCCAAATTATGTCTCAAGTTTCCATTATTATACCAAGAAGGCATCCAAAACATCCTATTTAGCTGGAGACGGATCATCGGTTGGGCATTAAATGGAGTTGTGACTTCTGCTATCATATTCTTCTTTTGCATCCGTGCCATGGAACATCAGGCATTCCGTAAAAGTGGTGAAGTCGTGGGGCTGGAAGTTCTTGGTGCCACCATGTACACCTGTGCTGTGTGGGTGGTGAATTGCCAAATGGCATTATCTATTTCTTACTTCACTTATGTACAACATCTATTCATCTGGGGAAGCATTACATTCTGGTATATATTCCTCCTGGCTTATGGAGCCATAGATCCTTCCTTCTCAACCACTGCCTACAAGGTCTTCATTGAAGCTCTCGCACCATCCCCATCTTTCTGGATCATCACTTTGCTCATTCTCATTGCTTCCCTCCTTCCATATTTCGTCTACTCGTCCATCCAAATGCGCTTCTTCCCCATGTATCATCAAATGATTCAGTGGATAAGAATGGACGGGCAAACAAGTGATCCAGAATACTGCAATGTGGTAAGGCAGCGATCAATAAGAAGCACAACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTTAATGCATCCAAAAGAGTTGGATCATCCACAAGATCTGAAACAGCATCCAATCATTTTGAAACATCCAGAAGACTTGAAGCATCCAAACGTCCTGAAGGGACCACTGAGGACAGATAA 3675 0.406 MAGGRRRRHHFGRIHAFTCGKASLKEEHSLIGGPGFSRKVYCNDPESATASLLNYGDNYVRTTKYTLATFIPKSLFEQFRRVANFYFLVCAILSFFPVSPYSGVSNVVPLLVVVAATMVKEFIEDFRRKKQDIEMNNRKVKVHRGGGDFAYSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSYFENFRSVISCEDPNANLYTFVGSMELEDQQYPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFLLIVISFIGSILFGITTNDDIENGRMKRWYLRPDDTEIYYDPNEPVAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDEKMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRVATEVERALSRRHESDSGQELKENKNIAKVGESKSSIKGFNFKDERIMNGNWMKEPNANVIQNFLRLLAVCHTAIPEVDEGTGKVSYEAESPDEAAFVIAARELGFEFYERTHTNISLRELDPITGLKTQRSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERIAKNGREFEEMTKQHISEYADSGLRTLILAYRELSEEEYHRFNKEFTEAKNLVSADQEQIVENIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGYACSLLRQGMKQIIISSDTPENKSLEKMEDKSAAEAAMKSSVIRQLREAKALLSSSHENYEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNLAFGFTLFFFEMYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWRRIIGWALNGVVTSAIIFFFCIRAMEHQAFRKSGEVVGLEVLGATMYTCAVWVVNCQMALSISYFTYVQHLFIWGSITFWYIFLLAYGAIDPSFSTTAYKVFIEALAPSPSFWIITLLILIASLLPYFVYSSIQMRFFPMYHQMIQWIRMDGQTSDPEYCNVVRQRSIRSTTVGFTARLEASKRFNASKRVGSSTRSETASNHFETSRRLEASKRPEGTTEDR 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04820 1224 MobiDBLite consensus disorder prediction 1203 1224 - -
Spst3g04820 1224 SUPERFAMILY Calcium ATPase, transduction domain A 137 285 IPR008250 -
Spst3g04820 1224 Pfam Cation transport ATPase (P-type) 533 623 - -
Spst3g04820 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 488 700 IPR023299 GO:0000166
Spst3g04820 1224 Gene3D - 116 286 - -
Spst3g04820 1224 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Spst3g04820 1224 MobiDBLite consensus disorder prediction 1188 1224 - -
Spst3g04820 1224 SFLD p-type atpase 408 913 IPR044492 -
Spst3g04820 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1151 - -
Spst3g04820 1224 Gene3D - 694 902 IPR023214 -
Spst3g04820 1224 MobiDBLite consensus disorder prediction 1188 1202 - -
Spst3g04820 1224 FunFam Phospholipid-transporting ATPase 116 286 - -
Spst3g04820 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Spst3g04820 1224 NCBIfam HAD-IC family P-type ATPase 828 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g04820 1224 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst3g04820 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Spst3g04820 1224 FunFam Phospholipid-transporting ATPase 540 698 - -
Spst3g04820 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1140 IPR023298 -
Spst3g04820 1224 SFLD Haloacid Dehalogenase 408 913 - -
Spst3g04820 1224 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Spst3g04820 1224 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Spst3g04820 1224 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Spst3g04820 1224 SUPERFAMILY HAD-like 419 917 IPR036412 -
Spst3g04820 1224 FunFam Phospholipid-transporting ATPase 698 902 - -
Spst3g04820 1224 Gene3D - 559 677 IPR023299 GO:0000166
Spst3g04820 1224 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04820 Spst-Chr3 99901462 99907141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04820 10 1188 Primary Pumps ATPases AT3G25610 70.025 0.0 1771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04820 K01530 - gmx:100799312 2191