Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04806 ATGAACACTTATCAAGTGAACTTCGAAGAAAATGAAAGTGCTGACGTTACCGTTGTTGCTTTGTGCGAAGGCCAGGCACTGTTGCTGTTTCTAGCATCCGTTGCATCTTTGCTCTCCCTAATGGCACAAGATACTGTTTTTGGTGCTGACTCACCTCGACGACGTCTATTGCGAGATCAGGTTCAAGTGGTGAAAAGGAAGGATTCTGATCGCTATGAAATTGTTCCTATCCAAGATTCCCTGTCATTTGAGAAAGGATTTTTCATATTCATTCGTGCGTGCCAATTGTTGGCTCAAAAGAATGATGGAATCATATTAGTAGGAGTTGCAGGTCCATCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGATCCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAATGATTCTAGTAGAATTATTGATGGAAACTTTGATGACCCTCGGTTGACGGATTATGATACCTTGCTTGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGCTTAATCTCAAATTAGGGAAACCTGGAAAAGAGAACACAAAAGCTAATGATATTGAACAATGTTTTATAAGGATCAAGTTATTAGATCTGAAATTCTTTAGATGTGGAATTAAAAAATCGATGACTATTGAAGTCCCTGCCTCTCGTATTGTAATCATAGAAGGCATATATGCCTTAAGTGAAAAATTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTGACGGGTGGAGTTCATTTTGACCTTGTTAAGCGTGTATTACGGGACATTCACCGAGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGTCAGCAAGAGCTGTGACAGTTGATCAAATCAAGGAAATTATTGACGCACAGCATACTGAAACCAAAGAGGAAACATATGACATATTTCTTCTACCGCCTGGGGAAGACCCCGAAGCTTGTCAATCATATTTGAGAATGAGAAACCGCGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACAGATAGTCCATTCATAATATCACCTAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGAGGACTGATGGCCTTAGGATACACAATTGCATCTATCCTGAAAAGAAGCAGTCACATCTTTCGTGATGATAAAGTGACCATAAAAACTGATTGGTTAGAACAACTTAATCGCACATATGTTCAGGTGCAAGGGAAAGACAGGAACTATTGCAAATTTGTAGCAGAGAAATTGGGATTGGATGGTTCCTATGTTCCTCGCACTTATATTGAACAAATTCAGCTAGAAAAGCTTGTAAACGATGTCATAGCATTGCCAGACGATCTTAAGACAAAACTCAGCTTAGACGATGACTTGGTTTCAAGCCCCAAAGAAGCCCTGTCCAGAGCTTCTGCAGATAGGAGAATAAAGTATCTTAATCGTGGTATTTCACACTCATATTCAACTCAAAGGGACAAGATTCTACCTAAGCTGACTAAACTTGCTATAAATAACAGAAGATTCGATGGAAGAGCTCTAGAATCACCTGCACCGATTGCTAACCATGGGGTCATCACTCAACTTTCTGATCAAATTTCTACACTAAATGAAAGAATGGATGAATTCACCTCCCGTATTGAAGAATTGAATTCAAAATTTTCTACCAACAAAGTTTCAGCCAGTCAACAAAACTTGGCTTCACAGACCGAAGCCAGTAATGGCTCAGGCCCCACTTCCTTCTTTGTAACTGGATTAGGCAATGGTTCATTGACTGGATCAGTGCTGCCTAAGTCTTCATCATCTTCTCAATTGGCGAAAGAGTCTCCCCTGATGGATGAGGTATTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTCTGAGCAATCTTTTGCACGAATACTTTGGAGAAAGGTCCCGACTTGGAAGACCAAATCAGACAGGTAGAATGCTTGAAGCTGATTATGTTGCCATCCCCTTGGTTCTAACTCTGGCCATTGGTGTTGTTGGTGTGTTTTTGTTCAGGGGTGTGGCATCCCAAAAATAG 2109 0.4045 MNTYQVNFEENESADVTVVALCEGQALLLFLASVASLLSLMAQDTVFGADSPRRRLLRDQVQVVKRKDSDRYEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPIYDFKSSSRIGYRLNLKLGKPGKENTKANDIEQCFIRIKLLDLKFFRCGIKKSMTIEVPASRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETSARAVTVDQIKEIIDAQHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIASILKRSSHIFRDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFVAEKLGLDGSYVPRTYIEQIQLEKLVNDVIALPDDLKTKLSLDDDLVSSPKEALSRASADRRIKYLNRGISHSYSTQRDKILPKLTKLAINNRRFDGRALESPAPIANHGVITQLSDQISTLNERMDEFTSRIEELNSKFSTNKVSASQQNLASQTEASNGSGPTSFFVTGLGNGSLTGSVLPKSSSSSQLAKESPLMDEVLVIARGQRQIMHQLDTLSNLLHEYFGERSRLGRPNQTGRMLEADYVAIPLVLTLAIGVVGVFLFRGVASQK 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04806 702 PRINTS Uridine kinase signature 104 121 - -
Spst3g04806 702 PRINTS Uridine kinase signature 171 186 - -
Spst3g04806 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 299 IPR027417 -
Spst3g04806 702 Gene3D - 105 323 IPR027417 -
Spst3g04806 702 SUPERFAMILY CYTH-like phosphatases 299 449 IPR033469 -
Spst3g04806 702 Coils Coil 542 569 - -
Spst3g04806 702 Pfam Phosphoribulokinase / Uridine kinase family 107 295 IPR006083 GO:0005524|GO:0016301
Spst3g04806 702 ProSiteProfiles CYTH domain profile. 286 452 IPR023577 -
Spst3g04806 702 PANTHER URIDINE KINASE 57 464 - -
Spst3g04806 702 Pfam CYTH domain 314 446 IPR023577 -
Spst3g04806 702 CDD UMPK_like 106 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04806 Spst-Chr3 99775643 99795730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04806 106 295 PRT Gene Family AT5G40870 24.121 2.39e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04806 K00876 - gmx:100803122 1051.58