Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04805 ATGGGGTGCTCATTCTCCGGTTTAAACGCGCTCTACGACTCCGTCAACGGCGGAGGCGATGCGTGGATCAACGAGAACCGTTTCCGCATCGTGCGCCAGCTCGGAGAAGGGGGCTTCGCCTACGTCTACCTCGTCAAGGAGCTTATCAACGACTCTGCCGCCGGTGGCCTCGCCAAGAAGCTCAAACACTCCTCTCATCTCTCCGATGATGGGACTTACGCTATGAAAAAGGTCCTCATTCAGAACAATGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCGTATTTCATCATTGTTTAATCATCCCAATCTGCTCCCACTTCTTGATCATGCTATTATTTCTGTTAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCTTACTTGCTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAATGTAATGAAATCCAGGAAGGAATTCTATTCCACCTCAGATGTACTTCAAATATTCCGTCAGCTTTGTGCAGGACTTAAGCACATGCACAGTTTTGATCCTCCTTATGCACATAATGATGTCAAACCTGGTAATGTTCTCATAACACGCAGAAGAGGGCAACCACCTCTTGCCATTCTGATGGATTTTGGCAGTGCTCGTCCTGCAAGGAAGCAAATTACCAACAGATCCGAGGCACTCCAATTGCAGGAATGGGCATCCGAACACTGCTCTGCACCTTTCCGAGCTCCTGAGCTATGGGATTGTCCAAGCCAAGCTGATATAGATGAGAGGACTGACATTTGGTCACTAGGATGCACATTATATGCGATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTGTTGTAAATGCTCAGATCAAATGGCCAGCTGGACCTAAGCCTCCATATCCGGAAGCTTTTCATCAGTTTGTGTCGTGGATGCTTCAGCCGGTTGCTATGAGGCCCCGGATAGATGATATCATTATCCATGTGGACAAGTTGATTGCTAAGTTTTCCAATTGA 1026 0.4727 MGCSFSGLNALYDSVNGGGDAWINENRFRIVRQLGEGGFAYVYLVKELINDSAAGGLAKKLKHSSHLSDDGTYAMKKVLIQNNEQLELVREEIRISSLFNHPNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNANVMKSRKEFYSTSDVLQIFRQLCAGLKHMHSFDPPYAHNDVKPGNVLITRRRGQPPLAILMDFGSARPARKQITNRSEALQLQEWASEHCSAPFRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQIKWPAGPKPPYPEAFHQFVSWMLQPVAMRPRIDDIIIHVDKLIAKFSN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04805 341 ProSiteProfiles Protein kinase domain profile. 28 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04805 341 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 339 - -
Spst3g04805 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Spst3g04805 341 Gene3D Transferase(Phosphotransferase) domain 1 17 340 - -
Spst3g04805 341 SUPERFAMILY Protein kinase-like (PK-like) 21 331 IPR011009 -
Spst3g04805 341 ProSitePatterns Protein kinases ATP-binding region signature. 34 60 IPR017441 GO:0005524
Spst3g04805 341 CDD STKc_16 27 337 - -
Spst3g04805 341 Pfam Protein kinase domain 66 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04805 341 SMART serkin_6 28 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04805 Spst-Chr3 99763011 99769479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04805 33 295 EF-hand Containing Proteins AT4G04710 26.894 1.91e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Spst3g04805 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04805 K08856 - gmx:100803659 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04805 3 99763011 99769479 Spst3g04805 3 99763011 99769479 ECH