Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04800 ATGGAATGCAATGAAGATGATGAACTCCATGTAGCACCTTATGCTTCCTTAACACACTGCTTTCATTATCCTTCTCCAGCCCAGAAACCCATCCTGACCTCAACAATGGAAACGGGTGAAGCCCATGCTTTGACCCATCTGGATCAACCTCAAAGTTTACACCATATTCCATTTTTCTGTTCCCAAGTGAACCTTCCAAACAACAGCCACAACCCAATTCAAATCCCACTCCATAAACCCTCTCCCAACACATCATCCAACAGTAACAACAACAACACCACCAATTCTGACGAAGCAAGGGCTCTCCTTGATGACAGAAAGAAGAAGAGGATGTTCTCCAACAGAGAATCTGCTCGCAGGTCGCGCATGCGAAAGAAGCAACAGATTGAAGTCCTGCAGTATCACGTTGATCATCTGCAGACTCTAAACCATCAACTGTCCCAAAAGATCATTTACTTGCTGGAATGTAACCAACAAATCCACCAACAGAATGCGCAGCTAAAAGAGAAAGTTTCCTCTCTTCAGGTAGCACTCTCTGACTTGTTGGTTCCTGCAGGGGGTGGTGACCAACCTCACCACATCCCTAATGGCTTCCTAGCTGAGCCTTCAACCAGACCAGTTGCAAGTTCAAGAGCATAG 639 0.4585 MECNEDDELHVAPYASLTHCFHYPSPAQKPILTSTMETGEAHALTHLDQPQSLHHIPFFCSQVNLPNNSHNPIQIPLHKPSPNTSSNSNNNNTTNSDEARALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQIHQQNAQLKEKVSSLQVALSDLLVPAGGGDQPHHIPNGFLAEPSTRPVASSRA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04800 212 Pfam bZIP transcription factor 106 164 IPR004827 GO:0003700|GO:0006355
Spst3g04800 212 MobiDBLite consensus disorder prediction 70 104 - -
Spst3g04800 212 FunFam BZIP transcription factor 104 155 - -
Spst3g04800 212 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 44 186 IPR044521 -
Spst3g04800 212 MobiDBLite consensus disorder prediction 193 212 - -
Spst3g04800 212 SUPERFAMILY Leucine zipper domain 106 162 IPR046347 GO:0003700|GO:0006355
Spst3g04800 212 Gene3D - 105 159 - -
Spst3g04800 212 MobiDBLite consensus disorder prediction 70 98 - -
Spst3g04800 212 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 167 IPR004827 GO:0003700|GO:0006355
Spst3g04800 212 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 109 124 IPR004827 GO:0003700|GO:0006355
Spst3g04800 212 Coils Coil 157 177 - -
Spst3g04800 212 SMART brlzneu 102 166 IPR004827 GO:0003700|GO:0006355
Spst3g04800 212 CDD bZIP_plant_GBF1 107 155 IPR045314 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04800 104 209 bZIP Transcription Factor Family AT5G60830 52.778 3.24e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst3g04800 bZIP_1 1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04800 - - aprc:113874797 329.717