Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04771 ATGGCAGCAAAGCTCTTGCATTCTTTAGCAGATGACAACCCAGATTTACAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTTTTTGATCGTCACCACATTATTTCTTCTCCCTGCATTACCCAGAAGAGGCTTCCTCCAGGTAATTCCCACTTCAATTATGACAGCCTGGAAAGAGATTCTAAAAGCATACACCAGGAACAATCAACAGCAGATATGAGGGGCACGAGTGATAAGCTCAAAATTTCGACAGAATCATCAAGAACTTCATTCTCTTCTTCTTGTTCATTATCAATGTCCTCTTTGGACTACAAAGCTCAAGCAGATGCTCCCCTTGAAAGGATTGGTTTTCCTGAAAATCCTATGAGGGGCCCAGTTGTGTACCAAACATGTACCTCTCCCCATTTAGGATGTCCCTCCCTTGACCTGAGGGATGTGGTGAAGGACTCTATATATAGGGAAGCCAGAGGACTGTCCAAAGAAAGGGATTCCCCAAGACATTCTCAGCTGTCCAAATCTGTTGATAGAAAGCAAACTCCTATTGATCTAAAGGAGTCCTTGCGAGTCCTTGCTAAACTTAGAGAAGCACCTCGGCATTATGTTGAAGCTAAAGAACTTCCAAGATTATCAAATGAAGCAAAAGATGGACATTGGCATTCCATCTCAAAGGATCCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGTGAGATGTCTTTGGAATCACATGATACTTTGAAATGCCCACCAAAGCTAAAAGAGCTTCCTAGACTTTCATTGGACAGTAGGGAAGGTTCATGGCGCACACACGGCTCTGATTCAAAACCCGGTAACCTTTCAAGTACAAGTGGTGCCTCCACCTCAGTTGACAACGTTTCTAGTCTACATCAGCCTTCAGAAAACCAGAGACGACCACCTAGTATTGTAGCAAAATTAATGGGCTTGGAAGCATTGCCAGAATCCTATACGGCTTGTAATAACAAGTCAAGTTTGAGTGCAGCTGGCTCAACTCAAAGCAATGATCAGTTTTGGAAAAACGGATCTATTAGACCACTTCGAGTTTCGACTTTCCCTGAAATCTCGTTGGCAGAGAAAGAGATGACACCCCCACGGTGGAAGAACCCTGATTTGGTTGTGAAACCAATCTTGAGCACAAAGTTTCCCATTGAACCTGCACCATGGAAGCCGCAGGATGGAAACCAAAGCTCTGAGAAACTAACTTCCAAGGCCATAAAACCTACAGCAAGAACACCAGAATCATTTCCTTCAGTTTATACTGAGATTGAGAAGAGATTGAAGGATCTTGAGTTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATACTGGAAGCAATGCAAGTAAAAGGTCTGTTAGAGACCAGAGAAGAAGACCAAGCTTCAAATGTTGTTGGAAATGAAGGAGACAGTGAACTAAAACCAACCTTAATTCATCATTCTATGTCTATGAGGCAGCAAACAGCCTGGGAATCTGATTCTGCAATGACTATAGAGTCACCAATAGTAATCATGAAACCAGCAAAACTTGTTGAGAAAACCAGAATTTCTGCTTCTTCAGTCTTTCCAATTGATGAACTTTCTGATTCCAATAAACTTCAGAATAATGGTGTACATGTACATGATAAAAAGGGGACAGCTTCCAGTCAAATAGCAAAAGATCAGTCTGTCAGAAGCAGTTACAAGGATGCTTCTACCAGTTATAGAGAAAAGAAAGCAAATAGTATCAAGACTATAAAATCAGCACAATCCCAACCAAAGTCTACTCTATTTACAAAAGAAAATAGCCCAAGCTCAGTAAAGAATTCAGGATCTGTTAGCCCAAGAATGCAACAGAAGAAGTTAGAATCGGAGAAGCAATCTCGCCTTCGTACCCCACCATCAGATTCGAGTAATCCGAGAAGGCAACCCTGTAAGCAGACAACTGACTCAGATTCTCCCAGTCGAAAACTGAGACTTAAAGTCCCTAATTCACAGTATAGTGATGACAGATTAAGTGAGACTAGCAATGAATGGAGAAGTTTAAGTAGCCAGTGGGATGAAGTATCTCTGCAATCAGACAGTAACACTTTCGACTCAAAGATGGATATTGAAGTTACCAGCAGTTTACAATCTGTTGAAATTATTGATATCCAAAGCCCATCTTGGAAGGCTACTGAGCATTTGGTTTCAGGATCAACGCATAAGAAATCAATGCTGAGGTGGAACGAGGATGAGTCAATTACAAAACTTGCAACACATCCCTCATATGATCTTGTCGATGTCTCAGTATACAAATTCGATATGTCATCCCCAGCAAAGAGCATATCCAATATTCGTCAAGCTGACGGTGGTCAAGAATCTAAAGAAAATTATCATACAGATCATTGGAGCCCTGTAGATGGCCTCTTCGTTAACAACCCAAGATATAGAGAGATTAACCACAGGAAATTGCAAAGCATAGGTCGCCTGATTCAAAAGCTTAGACAACTAAACTCAAGTCATGATGAAACTAGAATCGATTACATAGCTTCCCTTTGTGAAAATACAAATTCAGACCACAGATACATTGCTGAAATACTGTTGGCTTCAGGGCTACTACTGAGAGCTTTGAGTTCTGAGTTGTTGACATTTCAACATCACTCATCAGGTCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAGCAGACCAAGTTAAGTAGTTTGGTTTCCAAAGAAGAAAGCAGCTTTGGAAAAGTTGCTTACATGAAGCTAAATATAGAGAAGTGGCATAGGAAACTCATCTTTGATACTGTGAATGAGATTCTTGGTACAAAGCTAGGCTCTTCTCTTGAGCCATGGTTGAAGCCTAATGGACTTCCAATGAAATTCGTCACTGCACAAAAGCTTCTTAAAGAACTTTGCTTTGAGATACAAGAACTTCAATATGTGAAGCCAGATTGCGGTATAAAAGATGAAGGGGATGGTCTGAAAAGCATGCTATGGGCAGATGTGATGTGCCACTCAGAAAACTGGAGAGGTTTCCCTGGTCAATTACCTGGGGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTACTTGATGAGTTTGTGATTGGTGAAGTGGCTAGTTTGCGAGTGTAG 3132 0.4122 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHIISSPCITQKRLPPGNSHFNYDSLERDSKSIHQEQSTADMRGTSDKLKISTESSRTSFSSSCSLSMSSLDYKAQADAPLERIGFPENPMRGPVVYQTCTSPHLGCPSLDLRDVVKDSIYREARGLSKERDSPRHSQLSKSVDRKQTPIDLKESLRVLAKLREAPRHYVEAKELPRLSNEAKDGHWHSISKDPPRFSYDGRETSEMSLESHDTLKCPPKLKELPRLSLDSREGSWRTHGSDSKPGNLSSTSGASTSVDNVSSLHQPSENQRRPPSIVAKLMGLEALPESYTACNNKSSLSAAGSTQSNDQFWKNGSIRPLRVSTFPEISLAEKEMTPPRWKNPDLVVKPILSTKFPIEPAPWKPQDGNQSSEKLTSKAIKPTARTPESFPSVYTEIEKRLKDLEFKQSGRDLRALKRILEAMQVKGLLETREEDQASNVVGNEGDSELKPTLIHHSMSMRQQTAWESDSAMTIESPIVIMKPAKLVEKTRISASSVFPIDELSDSNKLQNNGVHVHDKKGTASSQIAKDQSVRSSYKDASTSYREKKANSIKTIKSAQSQPKSTLFTKENSPSSVKNSGSVSPRMQQKKLESEKQSRLRTPPSDSSNPRRQPCKQTTDSDSPSRKLRLKVPNSQYSDDRLSETSNEWRSLSSQWDEVSLQSDSNTFDSKMDIEVTSSLQSVEIIDIQSPSWKATEHLVSGSTHKKSMLRWNEDESITKLATHPSYDLVDVSVYKFDMSSPAKSISNIRQADGGQESKENYHTDHWSPVDGLFVNNPRYREINHRKLQSIGRLIQKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLVSKEESSFGKVAYMKLNIEKWHRKLIFDTVNEILGTKLGSSLEPWLKPNGLPMKFVTAQKLLKELCFEIQELQYVKPDCGIKDEGDGLKSMLWADVMCHSENWRGFPGQLPGVVLDVERQIFKDLLDEFVIGEVASLRV 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04771 1043 MobiDBLite consensus disorder prediction 585 619 - -
Spst3g04771 1043 Pfam DUF761-associated sequence motif 300 323 IPR032795 -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 157 180 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 212 306 - -
Spst3g04771 1043 PANTHER LONGIFOLIA PROTEIN 1 1040 IPR033334 GO:0051513
Spst3g04771 1043 MobiDBLite consensus disorder prediction 272 305 - -
Spst3g04771 1043 Pfam Domain of unknown function (DUF4378) 854 1032 IPR025486 -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 632 652 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 63 82 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 536 679 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 63 86 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 557 571 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 390 409 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 212 271 - -
Spst3g04771 1043 MobiDBLite consensus disorder prediction 659 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04771 Spst-Chr3 99459632 99464092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04771 136 1043 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 42.276 1.35e-171 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04771 - - vum:124830690 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04771 3 99459632 99464092 Spst3g04771 3 99459632 99464092 ECH