Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04751 ATGTCTCTTTGGGTTATTGTCTTTGCAACTGTTGCAGCTGCGACCCTTATATACCGGCTTTTGAAGCTCATAACCGGGCCTTCATTACCTCTACCACGAGGGCCCAGGCCATGGCCCATCGTGGGAAATTTGCCTCACATGGGCCCAGCGCCACACCAGGGCCTGGCTGCCTTGGCCAAGACTTACGGGCCGCTCATGCACCTCCGGTTGGGTTCCGTGGACATGGTGGTGGCAGCTTCCGCCGCCGTGGCGGAGCAGTTCTTCAAGGTTCACGACGCCAATTTCTGCAGCCGGCCACATAACTTCAGAACCGCATACTTGTCGTATAACAAACAAAACCTTGTTTTTACTCCGAACGGGCCACTGTGGAGATTTCTACGGAAATTAAGTACCGTTCACGTGTTTTCTGCTAAGGCCATGGATGATTTTAGTCACCTGCGACAGGACATGTTTACAGCTGGATCAGACACATCATCAAGCACAATAGAGTGGGCTCTTGCAGAACTTATTAAGAACCCTAGAGTTATGGTCCAAGTCCAAGAAGAGTTGAATATTGTTGTGGGACAGGATAGGCTTGTGACTGAATTAGACTTGCCCCACCTTCCCTACATGGATGCTGTGGTGAAGGAAACGCTACGTCTCCACCCACCAACCCCTCTTTCCCTCCCACGAGTTGCTGAGCAGAGACGTGACCCTAAGGAATGGGTTGGTCCATTCGAGTTCAAGCCAGAAAGGTTCCTCCCCGGTAGTGAGAAGGTTGATGTTGATGTTAGGGGCAATAACTTTGAGGTTCTACCTTTTGGTGCTGGACGTAGAGTATGTGTTGGTATGAACTTAGGCATAAGGATGGTTCAACTGTTCATTGCTACTCTAGTTCATGCATTTGATTGGGAGTTGGAGAATGGGTTTGACCCAAAAAAGCTTAACATGGACGAAGCATATGGACTCACTCTCCAAAGAGCAGTGCCTCTCGTTGTCCACCCTCGCCCTAGGCTCTCAAAACATGTATATTCATCTTCACCATAA 1026 0.4961 MSLWVIVFATVAAATLIYRLLKLITGPSLPLPRGPRPWPIVGNLPHMGPAPHQGLAALAKTYGPLMHLRLGSVDMVVAASAAVAEQFFKVHDANFCSRPHNFRTAYLSYNKQNLVFTPNGPLWRFLRKLSTVHVFSAKAMDDFSHLRQDMFTAGSDTSSSTIEWALAELIKNPRVMVQVQEELNIVVGQDRLVTELDLPHLPYMDAVVKETLRLHPPTPLSLPRVAEQRRDPKEWVGPFEFKPERFLPGSEKVDVDVRGNNFEVLPFGAGRRVCVGMNLGIRMVQLFIATLVHAFDWELENGFDPKKLNMDEAYGLTLQRAVPLVVHPRPRLSKHVYSSSP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04751 341 Gene3D Cytochrome P450 25 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 SUPERFAMILY Cytochrome P450 30 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 Gene3D Cytochrome P450 146 335 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PANTHER CYTOCHROME P450 98A9 6 150 - -
Spst3g04751 341 Pfam Cytochrome P450 230 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 Pfam Cytochrome P450 32 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 Pfam Cytochrome P450 147 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 267 276 IPR017972 GO:0005506|GO:0016705
Spst3g04751 341 PRINTS E-class P450 group I signature 264 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PRINTS E-class P450 group I signature 274 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PRINTS P450 superfamily signature 265 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PRINTS P450 superfamily signature 153 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04751 341 PRINTS P450 superfamily signature 206 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04751 Spst-Chr3 99251407 99258501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04751 149 338 Cytochrome P450 AT5G07990 57.547 5.57e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04751 K05280 - gmx:100779588 324.324