Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04730 ATGTCAGAGCAGGAAACTCGTTCTGGGTGCTTACTGTTATTCTTTTTCTTGATCCTTCTTTCAGGTAAAGCTGTTGTAGGGGAATCTTTGGAAACAGACAAAGAGGTTCTGCTGGAACTGAAATCGTACCTGGACAACAAAACTCTTGCAGACAAAGGAGGGTACATAAATTGGAATACCAATAGCTCCAATCCTTGTGAATGGAGAGAAATTTCATGCAGTGCTACGAGGAGGGTGGTTGGCATAGACCTTTCTCAGAGTGACATCACTGGTGAGATATTCAAGAATTTCTCGCAGCTCACTGAACTCACACACCTTGATCTCTCTCAGAACACACTATCTGGTGAGATTCCCGAGGACTTGAGGCGCTGCCACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAATTTGACTGGATTGACAAGCTTGCACACACTGGACTTATCACATAACAGATTTTTTGGGGATATCCAGTTGAGTTTCCCAGCCATTTGTGACAATTTAGTCACTCTGAATGTCTCAGGTAATAACTTGACTGGTAGGATTGAAAACTGCTTTGATCAATGTCTCAAGTTGCAGTACTTGGATTTGAGCACCAACCGTCTGAGTGGAAGCTTGTGGATGAAGTTTGCGAGGCTCAAAACTTTTTCTGTCGCGGAAAACCATCTGACTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGTAGCCTTGAAGAACTAGACCTTTCACAAAATGGATTTGTTGGTGAGGCACCAAAGGGGGTTGCTAACTGCAAGAATTTAAGCAGTCTGAATCTTTCTAGTAACAAATTTGTTGGGGGTATTCCCGTTGAAATAGGATCTATTTCAGGACTCAAAGCATTGTACTTGGGGAACAATAGCTTTTCAAGAGAGATTCCGGAGTCCCTTTTGAACTTGACTAATTTGGCTTTCTTGGATTTGAGCAGAAACCAATTTGGTGGGGAAATACAAGAGATATTTGGGAAATTCAAGCAAGTGAGTTTTCTTCTGTTGCACTCAAATAATTACTCTGGAGGATTGAGATCCTCAGGAATTCTCACATTGCCAAAAATTTGGCGGTTAGACCTAAGCTACAACAACTTTTCAGGTCCGTTACCTGTTGAGATCTCTCAAATGTCAAGTTTGAAGTTTCTAATGTTATGCTACAACAAGTTCAATGGATCCATTCCACCCGAATTTGGAAACATGACTCAACTGCAAGCACTTGACCTTGCCTTCAACAATTTGAGTGGGTCTATACCACCAAGCCTTGGTAACTTGAACTCCCTCTTATGGTTGATGCTCGCAAACAATTATTTAACTGGTGAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTTGCCAACAATATGCTCTCTGGAAATTTGCCTTCTGAACTATCCAAAATTGGAAGGGATGCCATGACCACATTTGAATCAAATAGGCGAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAGGAGATGGATACCAGCAGATTACCCTCCATTCAGCTTCGTGTATAGCCTCTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAATTGATCAAAGGGTATGGTGTTTTCCCGTTTTGCACACCTGGTTCTTCCTTTCGCATAACACAGATATCCGGCTATATTCAGCTAAGTTCGAATCAGCTCAGTGGTGAAATTCCTCCAGAGATTGGATCAATGGTCAACTTCAGCATGATGCACTTGGGATTCAACAAACTCTCGGGGAAGTTACCTCGAGAGATAGGAAGTATTTCCATGGTGGTGTTAAACATCACAAGAAACGATTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAACTGTCTGATGAATCTGGATTTGTCATACAACAATTTCTCTGGAATGTTTCCAGCGAGTTTGAACAAATTGACAGAACTTAACAAGTTCAACATCTCATACAATCCCTTTATATCAGGTGAGGTCCCATCAACCGGACAGTTCGCTACCTTTGAGGAAAATTCATATTTTGGAGACCCCCTTTTGATCCTACCCAAGTTTATTCGGAACACTAGCAACGATAGAAACAACACCTATCAGAAAGACCATAAAAAGTCCTCAAGACTGTCTTTGTTTTTGGTGTTTGTGGTTATAACTCTGGTTTTCATTGTATGTGGACTTCTCACTGTCTTAGTCTGCGTATCGGCGAAAAGCCCTTCTGAGGAACCAAGGTACCTCTTGAGGGACAATACACAGTGGCATGATTCCAGCAGCTCCGGATCCTCACCATGGATGTCCGACACAGTCAAGGTCATCCGTTTGAACAAGACAGCTTTCACACATGCCGACATTCTGAAAGCAACTAGCAGCTTCTCAGAGGACAGAATCATTGGAAGAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGACGGCAGACAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAGGCTGAAATGGAGGTTCTGAGTGGTCATGGCTTTGGTTGGCCTCATCCAAACCTGGTCACCCTCTACGGCTGGTGCCTAAATGGTTCAGAAAAGATACTAATTTATGAGTTCATAGAGGGTGGAAGCTTGGAGGATGTAGTGACTGACAGAATACGTTTGACATGGAGGAGGAGGGTAGAAGTGGCAATTGATGTGGCACGTGCACTAGTGTATCTACACCACGAGTGCTACCCTTCTGTTGTGCACAGAGATGTGAAGGCTAGCAATGTGTTGCTAGATAAAGATGGGAAGGCGAAGGTAACTGATTTTGGGCTTGCTAGAGTGGTTGATGTTGGGGATAGCCATGTGAGCACTATGGTGGCTGGGACAGTGGGGTACGTTGCACCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGGTTATGGAGTTGGCAACAGCAAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTTGAATGGGCTAGGCGTGTTATGGGTTATGGACGCAACCACCATAATCACCATCATCATGGGTTGAGTCGTTCCGTGCCAGTTTTGCTGATGGGTTCTGGGCTTGTTGGTGGTGCTGAGGAGATGAGTGATTTGCTGAGGATTGGGGTGATGTGCACAGCTGATGCACCACAAGCCAGGCCTAACATGAAGGAGGTTCTTTCTATGCTCATTAAGATATTTATTTAA 3255 0.4381 MSEQETRSGCLLLFFFLILLSGKAVVGESLETDKEVLLELKSYLDNKTLADKGGYINWNTNSSNPCEWREISCSATRRVVGIDLSQSDITGEIFKNFSQLTELTHLDLSQNTLSGEIPEDLRRCHKLVHLNLSHNILEGELNLTGLTSLHTLDLSHNRFFGDIQLSFPAICDNLVTLNVSGNNLTGRIENCFDQCLKLQYLDLSTNRLSGSLWMKFARLKTFSVAENHLTGTIPLEALPLNCSLEELDLSQNGFVGEAPKGVANCKNLSSLNLSSNKFVGGIPVEIGSISGLKALYLGNNSFSREIPESLLNLTNLAFLDLSRNQFGGEIQEIFGKFKQVSFLLLHSNNYSGGLRSSGILTLPKIWRLDLSYNNFSGPLPVEISQMSSLKFLMLCYNKFNGSIPPEFGNMTQLQALDLAFNNLSGSIPPSLGNLNSLLWLMLANNYLTGEIPPELGNCSSLLWLNLANNMLSGNLPSELSKIGRDAMTTFESNRRNYRMVAGSGECLAMRRWIPADYPPFSFVYSLLTRKKCRELWDKLIKGYGVFPFCTPGSSFRITQISGYIQLSSNQLSGEIPPEIGSMVNFSMMHLGFNKLSGKLPREIGSISMVVLNITRNDFSGEIPQEIGNMNCLMNLDLSYNNFSGMFPASLNKLTELNKFNISYNPFISGEVPSTGQFATFEENSYFGDPLLILPKFIRNTSNDRNNTYQKDHKKSSRLSLFLVFVVITLVFIVCGLLTVLVCVSAKSPSEEPRYLLRDNTQWHDSSSSGSSPWMSDTVKVIRLNKTAFTHADILKATSSFSEDRIIGRGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILIYEFIEGGSLEDVVTDRIRLTWRRRVEVAIDVARALVYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLVMELATARRAVDGGEECLVEWARRVMGYGRNHHNHHHHGLSRSVPVLLMGSGLVGGAEEMSDLLRIGVMCTADAPQARPNMKEVLSMLIKIFI 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04730 1084 FunFam Inactive leucine-rich repeat receptor-like protein kinase 240 332 - -
Spst3g04730 1084 CDD STKc_IRAK 806 1082 - -
Spst3g04730 1084 ProSiteProfiles Protein kinase domain profile. 800 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04730 1084 FunFam Suppressor of npr1-1 constitutive 4 769 879 - -
Spst3g04730 1084 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 880 1083 - -
Spst3g04730 1084 PRINTS Leucine-rich repeat signature 103 116 - -
Spst3g04730 1084 PRINTS Leucine-rich repeat signature 146 159 - -
Spst3g04730 1084 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 47 239 - -
Spst3g04730 1084 Gene3D Ribonuclease Inhibitor 29 170 IPR032675 -
Spst3g04730 1084 Pfam Protein kinase domain 801 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04730 1084 ProSitePatterns Protein kinases ATP-binding region signature. 806 829 IPR017441 GO:0005524
Spst3g04730 1084 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 242 1081 - -
Spst3g04730 1084 Gene3D Phosphorylase Kinase; domain 1 765 879 - -
Spst3g04730 1084 Gene3D Ribonuclease Inhibitor 556 709 IPR032675 -
Spst3g04730 1084 Gene3D Ribonuclease Inhibitor 314 505 IPR032675 -
Spst3g04730 1084 Gene3D Ribonuclease Inhibitor 240 312 IPR032675 -
Spst3g04730 1084 Gene3D Ribonuclease Inhibitor 171 239 IPR032675 -
Spst3g04730 1084 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Spst3g04730 1084 SUPERFAMILY Protein kinase-like (PK-like) 782 1079 IPR011009 -
Spst3g04730 1084 SMART LRR_typ_2 100 124 IPR003591 -
Spst3g04730 1084 SMART LRR_typ_2 410 433 IPR003591 -
Spst3g04730 1084 SMART LRR_typ_2 434 458 IPR003591 -
Spst3g04730 1084 SMART LRR_typ_2 146 173 IPR003591 -
Spst3g04730 1084 SMART LRR_typ_2 289 313 IPR003591 -
Spst3g04730 1084 SMART LRR_typ_2 386 409 IPR003591 -
Spst3g04730 1084 FunFam Putative LRR receptor-like serine/threonine-protein kinase 337 498 - -
Spst3g04730 1084 Gene3D Transferase(Phosphotransferase) domain 1 880 1082 - -
Spst3g04730 1084 SUPERFAMILY L domain-like 553 673 - -
Spst3g04730 1084 SUPERFAMILY RNI-like 72 284 - -
Spst3g04730 1084 SUPERFAMILY L domain-like 216 477 - -
Spst3g04730 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Spst3g04730 1084 SMART serkin_6 800 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04730 1084 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Spst3g04730 1084 Pfam Leucine rich repeat 86 135 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04730 Spst-Chr3 99070622 99074021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04730 23 1082 Receptor kinase-like Gene Family AT4G39400 33.504 1.05e-153 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Spst3g04730 Pkinase 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04730 - - vum:124845100 1921.36