Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04723 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCCCGGATGTCTTGGAAGAAGATGAATATAGAGTTTATATGGGAGGCATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGAGAGACGCAGCCATATCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCTGTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAATACAATGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACCTATTGTCTCCTTTGAATCCGCAGCCTTCTCATTTAAGATATCTTCAATATATTTCCAGGAGAAATATGGGTTCTGAGTGGCCACCATCAGAAACACCCTTGTATTTGGATTGTGTGATTCTTAGAGTCCTTCCAGTATTTGACGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCAGGACCCTTCAGTTACTGCCAGTAGAAGTTCGAAGCTTCTCTTTTCGACTTCACAGTCCAAAAAGCATGTTCGCCATTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACATCCGATGTCGTATTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGAAGATTTTGTTAGTGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTGTTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGTAAATGAGACTGATAGTGCTGAGACAGAAAGTGCTTCACCTGAGGAGTTCTACGAAGTAGAAGAGATCTTCAGCAATGTAATGGATGCACAGGAAGGTAAGACAGAGTACTATTCTCACACATTCCATGAAAATGCAGTGGATGATGAAACTCATAAAGTGGTCTTGAGGCAAGAGCCCGATCCTCATACCTTTGAGGATTGTTCGCCAGATGACAGGATTCCCAAGCATGTTCACAAGATGGATTCTGGTATGAATGCTGTGAAAGACATCTCTATTGATGATGTGCACTATAAATTTGATGGGAGCATAGCTTCAGATCCTCATGCAGTGAAGGACATTGGTGTGGATGATGGAGAAATTAAGTCAACTTCCACTGCAGTTATTTCTGATATGATGAAACATCCTCTGGAAACAAAGGAAGTTACCATGGATGTGCAACAAGAATTTGCAGTAATTGAAAATGAATATGACGAAGTTAAGGAGGCAACAGAAAAGGAATTAGACTCCAAGGCTGGTCACCAGATGCCTGATTTGACTGAACAAAAATCTGGTAAACTATTTCCATCTACTGCCAAGAAACAACCTCCATCCAACTTGAAGTCAGTTGGAGATACAGGTGCAGCAAAGCAAAAGGTTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCAAAGCCTAATGCAGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTAACAAATTTGTCTTCTACAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTTACTGCAGTTGTTGCTTCTATTGACAGGCCAAATGACCCAAAAAGCAGGAAGGTGGCCACTTCAAAATCTTCTGGCTATATAGCAGCAGAAATAGATGAAAAAGGTCCACCATCACCATTGTCTTCAATTAAAGAGACATTGTTGCAGTCAGATACGTCTTTACAACAACAGAGCTCAGAGCAACTGCTACAGCCTCCTCCACCACCTCCCTCTCCTCCTCCTCCTCCCCCTCCCCCTCCCCCTCCCGCTCCAACTCACAGTCACAGTAGAATCTCTTCACATGTTTTGGAATCCTCATCGTTAAAGGATGATGTATCAGCTCAACACTATCCATCTTCTTTGGGTGGAAAGGGGTCCATCATGGTGCCACCACCACCACCACCACCACCGCCACCTTCAACTTTAACAACATTTATGAGACAACCTGCAACTTCTCTTCCTTCCCCTCCACCTCCACCCCCACCCCCACCCCCATTTTTTGGGCAAAATATAGGGAGCTCAATACCTTCTTCATGCCCTTGGAAATCTGTGGCTTCATCAATAGTTGGAGAGACTAGTGTATCTTTAACCCTTCCTACAGCCCCTCTTCCAGCTGCAAGCAGTGACATCACATTGGATGTTTCTCTAGTTGGTGCTACAGTGGTCCCTTCACAGCCTCCTCCGCCACCACCACCACCACCTACAAGGAATGAAGTTTTATCCATTCCTCCACTAACACCATTAGCATCATCTCTTCCAAAGCATGGACTTCCATCAATTCCCCCTCCTCCCATGTTTCCTACAGTTTCAACAAATAGGGCTCCACCCCCTCCTCCCCCACCAGCACCCCCATTTGCATCACATACAGCTTCATCTGCACCAGCAACCCCACCTCTAACTTCATCTCTGGCTCCACCTCCACCTCCCCCTCCCCCTCCTCCTCCACCTCCACCTCCCCCTCCTCCTCCACCACCCTTAGCTAATTCACATATATATTCAGCTACACCACCTATACCTCCACCACCACCTCCCCCTCCTTTTGGTAAAGCTTCACTACCTCCCTCTCCACCTCCTTTCAGTAGAGCTCCTCCACCACCACCACCACCACCACCACCACCACCTCCTCCTCCTTTTAGTCAAGCTCCAGCACCACCGCCTCCTTCATTGCATAGAACTCCACCCCCTCCTCTTGTTCCTCTATCAAGTGGGACCCAACCTCCACCTCCAATGTATAGAACTGCACCTCCCCCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCTCCCCCACCCCCACCCCCACCCCCACTTCCTACATCAAGTAG 3222 0.4615 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSHISDILSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRNMGSEWPPSETPLYLDCVILRVLPVFDDGKGCRPVVRVYGQDPSVTASRSSKLLFSTSQSKKHVRHYLQAECMLVKIDIRCRIQGDVVLECIHLSEDFVSEELMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDVNETDSAETESASPEEFYEVEEIFSNVMDAQEGKTEYYSHTFHENAVDDETHKVVLRQEPDPHTFEDCSPDDRIPKHVHKMDSGMNAVKDISIDDVHYKFDGSIASDPHAVKDIGVDDGEIKSTSTAVISDMMKHPLETKEVTMDVQQEFAVIENEYDEVKEATEKELDSKAGHQMPDLTEQKSGKLFPSTAKKQPPSNLKSVGDTGAAKQKVKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNLSSTKEKMEDAKTRSLSAPVVTAVVASIDRPNDPKSRKVATSKSSGYIAAEIDEKGPPSPLSSIKETLLQSDTSLQQQSSEQLLQPPPPPPSPPPPPPPPPPPAPTHSHSRISSHVLESSSLKDDVSAQHYPSSLGGKGSIMVPPPPPPPPPPSTLTTFMRQPATSLPSPPPPPPPPPPFFGQNIGSSIPSSCPWKSVASSIVGETSVSLTLPTAPLPAASSDITLDVSLVGATVVPSQPPPPPPPPPTRNEVLSIPPLTPLASSLPKHGLPSIPPPPMFPTVSTNRAPPPPPPPAPPFASHTASSAPATPPLTSSLAPPPPPPPPPPPPPPPPPPPPPLANSHIYSATPPIPPPPPPPPFGKASLPPSPPPFSRAPPPPPPPPPPPPPPPFSQAPAPPPPSLHRTPPPPLVPLSSGTQPPPPMYRTAPPPTTSSSIKWSPTSPTPTPTPTSYIK 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04723 1073 MobiDBLite consensus disorder prediction 681 700 - -
Spst3g04723 1073 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Spst3g04723 1073 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 931 1047 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 648 805 - -
Spst3g04723 1073 Gene3D - 207 336 - -
Spst3g04723 1073 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Spst3g04723 1073 PANTHER FORMIN-J 1 797 - -
Spst3g04723 1073 SMART PTEN_C2_2 198 338 IPR014020 -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 521 564 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 759 775 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 888 919 - -
Spst3g04723 1073 Gene3D Protein tyrosine phosphatase superfamily 14 206 IPR029021 -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 538 564 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 783 801 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 726 746 - -
Spst3g04723 1073 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 854 872 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 852 1073 - -
Spst3g04723 1073 MobiDBLite consensus disorder prediction 701 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04723 Spst-Chr3 98970773 98974823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04723 1 638 FH2 protein (formin) Gene Family AT5G07740 61.455 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04723 - - vun:114178199 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04723 3 98970773 98974823 Spst3g04723 3 98970773 98974823 ECH