Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04722 ATGCATGGAACACCACCTCCACCACCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTCCAATGTATGGAGCACCACCTCCACCATCGCCTCCAAAGAGTCGAGGACCACCACCTCCACCTCCTCCAATGTATGGAGCACCAACTCCACCACCACCACCTCCTGGTGGTCGAGGACCACCCCCTCCACCTCCCCCAATGTATGGAGCGCCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCGCCTCCTGGTGGTCGAGGACCACCTCCTCCTCCTCCTCCTGGTGGTCGAGGTCCCCCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCCCCTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTAGACCTCCTGGGGGTGGACCTCCACCACCTCCGCCCTTAGGTTCAAAAAGTGCAAATGATGGAGCTGATCCAAGAGGCAGGGGACGTGGGTATGCACGCCCTACAGGAGCTGCACCCCGAAAATCCTCTTTAAAGCCTTTGCATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTCGATGTTTCAGAACTAGAGAAGCTTTTCTCTTTAAATGTTCCAAAACCTTCTGATTCTGGTGGAAAATCTGGAGGGCGCCGCAAGTCTGTTGGATCTAAAGCTGACAGAGTCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTGACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTGGCTTTGGACGAGTCAGTATTAGATATTGATCAAGTGGAAAATCTCATTAAGTTCTGTCCTACCAAAGAGGAGATGGATCTTTTAAAGGGATACACAGGTGACAAGGAACTTCTGGGGAAGTGTGAACAGTATTTTTTGGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTTCATTCAAGATTCAGTTTGGTTCCCAGCTTACGGAATTTAAGAAGAGTTTAAACATTGTGAACTCTGCCTGTGAAGAGGTCCGAAATTCTGCTAAACTGAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCGAGGGGGTCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACAGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTCGCTGATAAGTCACCCAAACTCCTTGATTTCCACTTAGACCTTGTTAACCTGGAAGGTTCCACTAAGGTCATTGGTAATGGGAGGTGGAGCATATCAGCCCCTTCCTTCATGATTGCTCCTCCATTTGCACCATTGATAGACAAGGCTAAGCGACTTTCTATACCAGCCGAGCTGATACAATTAAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGACTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGTCTCCGAAGTTTTCCATAAGGTCCCATTGATGTGCTTATTGGCCACGTGTTCTAAAGAAGTGAAATACCTTCTAATAGAACTTGTAAGGGAGTTTATCACATTGAAAGAATTCATTGCTGTATCTGAGTCAGAGGGTAGAAATGCTGATGCACTTGCGCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGGTAAGTTGATGATTGACATGTTTATGTTGTTGGTACTTGTGACCACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAACTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCAAAGGGCGTTAACGTGACAAAGAAGGGTGCAAAAGATAATTTAGATGCAGAATGGATGCTTGCTATGATTGCATCGTCCAGTGTATACTTAGAACTGGCACTGGCTTCCATCATTCACTTGGCAATTTTTTTTGTGGCAACAAAGCAGATGCTTTTGGATTTGCGAAGCACCATAGTCCAACCCCAACCGTAG 2103 0.4665 MHGTPPPPPPPPMYGAPPPPPPPPMYGAPPPPSPPKSRGPPPPPPPMYGAPTPPPPPPGGRGPPPPPPPMYGAPPPGGRGPPPPPPPMYGAPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGVPGAPRPPGGGPPPPPPLGSKSANDGADPRGRGRGYARPTGAAPRKSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSLNVPKPSDSGGKSGGRRKSVGSKADRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDIDQVENLIKFCPTKEEMDLLKGYTGDKELLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQLTEFKKSLNIVNSACEEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPKLLDFHLDLVNLEGSTKVIGNGRWSISAPSFMIAPPFAPLIDKAKRLSIPAELIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHKVPLMCLLATCSKEVKYLLIELVREFITLKEFIAVSESEGRNADALALYFGEDPARCPFEQGKLMIDMFMLLVLVTTTLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNVTKKGAKDNLDAEWMLAMIASSSVYLELALASIIHLAIFFVATKQMLLDLRSTIVQPQP 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04722 700 MobiDBLite consensus disorder prediction 224 245 - -
Spst3g04722 700 Coils Coil 486 509 - -
Spst3g04722 700 Coils Coil 611 640 - -
Spst3g04722 700 SMART it6_source 171 625 IPR015425 -
Spst3g04722 700 PANTHER FORMIN-J 81 638 - -
Spst3g04722 700 ProSiteProfiles Formin homology-2 (FH2) domain profile. 171 636 IPR015425 -
Spst3g04722 700 Gene3D Formin, FH2 domain 169 622 IPR042201 -
Spst3g04722 700 MobiDBLite consensus disorder prediction 1 183 - -
Spst3g04722 700 SUPERFAMILY Formin homology 2 domain (FH2 domain) 126 630 - -
Spst3g04722 700 Pfam Formin Homology 2 Domain 176 451 IPR015425 -
Spst3g04722 700 MobiDBLite consensus disorder prediction 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04722 Spst-Chr3 98954758 98970603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04722 150 650 FH2 protein (formin) Gene Family AT5G07740 65.504 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04722 - - pvu:PHAVU_003G1878000 702.975