LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g04720	ATGGATGAGAACAAAGGAATCAGAGTGAAACCTACTTTTCTATTTTTCGCTCTTCACCTTTTACTTTTCACCCTTGCCAAATGCGACTCTTCTTTCCCACCTCAGGTCAACTATCTCATTGATTGTGGCTCCTCTCACCCCACTCAGCTCACAGATGGAAGAACCTTCAAATCTGATCGTGAAACCACTTCTCTCCTAGCCACAGCTGAAGATGTGCAGATATCAGCTGACTCCAGTCTCTCCCCTTCTATTCCTTCTTCATTACTTCCTTTGTATCAAACTGCAAGAGTTTTTCAAGAGGAATCCACCTACTCCTTTTACCTATCCAAAACTGGTAGACTTTGGGTTCGTCTCTACTTCTTTCCTCTCTCTAACCCTTCACGTAACCTAACAAGTGCTGTTTTCTCTGTCCAAACTAATCACCATGTGCTCCTGCACGAGTTCTCTGTGAGGAACAATGACTCACCTGTTTTCAAGGAATACCTTGTCAACGTTTCTGATAGTAGATTCTCACTCAAATTCATGCCCAAAAGAAACTCCTTTGCGTTCATCAATGCCATTGAGATTGTCTCCGCCCCTGACAATCTTATTTCAGATTCAGCAACTGCACTTTCCTCACTTGGAGAATTCAAAGGCTTGTTGACATCTGCTCTTGAAGTATCCTACAGAATAAACGTTGGCGGTCCCACCATAACTCCTGACAATGACACTTTGTCAAGAACATGGGAAACTGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGGCCTTTTCTGTCTCCAGCAAAAGCGTTAAGTATCCTCATACTGGGGTTACACCTTTGATTGCTCCAAACTTGGTTTATGCAAGTGTTGTGCACATGAAGAACGCTAAATTCATGCAACCAAATTTCAATCTCAGTTGGATGGTGAACGTGGAAAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATTGTGAGCAAGAGTCTTAATCAGTTATACTTCAATGTGTACATCAACGGGATTGAGGGTGTGTTAGCTTTGAATCTATCATCGCAAACCAAAGCTCTAGCAACTGCTTTTTACCAGGACTTTGTATTAGATGCATCGGATATAACAAACGGTTCCATATTGGTTCAGGTGGGACCAACCAATCTCCTACCAGGCACGGGCGATGCAATTCTCAATGGAATTGAGGTGATGAAGATTAGCAACGTGGCAGACAGCTTGGATGGTCTCTTCTCTGTTGATGGGAAATACAAAGGGCCAAATTCAACAACCATGGCAATGGAAATTTTGGCTTATGTTGGACTAGCATTGGCTGTGTCAACAATGTTGTTGATAGTAATAGTTTGCATAATAAGGTGGAAAAAGAGGCCTCAAGGTTTGGGAAACCATAATAGGTTCTCATCATGGCTCCTCCCTATCCATTCACCTATGTCGATGTCAAGCAAAAGCAGTTGCCGAAGCTCAACCACATCCAGTTCCCACACGAGCAAAAAACGTGGCCACTTTGTCACCCCACAAGGACCCGAAAGGTTCTTCCCCTTCAGTGAATTGCGAAAAGCCACCAACAATTTCGATGAGAAGAGAGTGATTGGCGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAGTTCAGAACAAGGCATGAATGAGTTCAGAACAGAACTAGAAATGCTGTCAAAGCTACGCCATCGCCACCTCGTCTCACTGATGGGTTTCTGCGATGAAAATTCAGAGATGGTTCTTGTGTATGAGTACATGGCTAATGGCCCTTTCCGTTCCCACCTCTATGGCTTCGACCTCCCTTGTTTGTCATGGCAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGTGGCTTGTACTATCTCCACACCGGCGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATCCTCTTAGATGAGAATTATGTTGCCAAGGTTTCTGACTTCGGTTTGTCAAAGGCTGTGCCAGAGAAAGGTCAAGTTAGCACAGCCGTGAAGGGTAGTTTTGGGTACCTTGACCCTGAGTACTATAGGAGCGAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTACTATGTGCTAGGCCAGTTATTTGCCCAACACGTCCAACAGAGGAGATTAACTTGGCTGAATGGGCAAAGAAACAGCATAGAAGAGGAATGCTTCGTGAAGCAATTGATCCACGTATTGTTGCGACTATAAATCCTCAATCGCTGACTGTTTTTGTGCAAGTTTCTGAGAAATGTTTAGCAGATTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAACATGCTTTGCGCCTACAAGAAGCTCCCTCAGGGATTGATGAACTGAGAATGTGA	2430	0.4399	MDENKGIRVKPTFLFFALHLLLFTLAKCDSSFPPQVNYLIDCGSSHPTQLTDGRTFKSDRETTSLLATAEDVQISADSSLSPSIPSSLLPLYQTARVFQEESTYSFYLSKTGRLWVRLYFFPLSNPSRNLTSAVFSVQTNHHVLLHEFSVRNNDSPVFKEYLVNVSDSRFSLKFMPKRNSFAFINAIEIVSAPDNLISDSATALSSLGEFKGLLTSALEVSYRINVGGPTITPDNDTLSRTWETDGSYNIFPQGSEAFSVSSKSVKYPHTGVTPLIAPNLVYASVVHMKNAKFMQPNFNLSWMVNVERSYSYLIRMHFCDIVSKSLNQLYFNVYINGIEGVLALNLSSQTKALATAFYQDFVLDASDITNGSILVQVGPTNLLPGTGDAILNGIEVMKISNVADSLDGLFSVDGKYKGPNSTTMAMEILAYVGLALAVSTMLLIVIVCIIRWKKRPQGLGNHNRFSSWLLPIHSPMSMSSKSSCRSSTTSSSHTSKKRGHFVTPQGPERFFPFSELRKATNNFDEKRVIGVGGFGKVYLGTLKDGTKVAIKRGSGSSEQGMNEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGFDLPCLSWQKRLEICIGAARGLYYLHTGAAQSITHRDVKTTNILLDENYVAKVSDFGLSKAVPEKGQVSTAVKGSFGYLDPEYYRSEQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQHRRGMLREAIDPRIVATINPQSLTVFVQVSEKCLADCGVDRPSMGDVLWHLEHALRLQEAPSGIDELRM	809

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g04720	809	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Spst3g04720	809	Gene3D	Phosphorylase Kinase; domain 1	482	598	-	-
	Spst3g04720	809	FunFam	Receptor-like protein kinase FERONIA	599	808	-	-
	Spst3g04720	809	Pfam	Malectin-like domain	40	399	IPR024788	-
	Spst3g04720	809	PANTHER	OS07G0166700 PROTEIN	509	798	IPR045272	GO:0004714\|GO:0006468
	Spst3g04720	809	ProSiteProfiles	Protein kinase domain profile.	523	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst3g04720	809	Pfam	Protein tyrosine and serine/threonine kinase	526	719	IPR001245	GO:0004672\|GO:0006468
	Spst3g04720	809	MobiDBLite	consensus disorder prediction	477	506	-	-
	Spst3g04720	809	SUPERFAMILY	Protein kinase-like (PK-like)	500	792	IPR011009	-
	Spst3g04720	809	ProSitePatterns	Protein kinases ATP-binding region signature.	529	551	IPR017441	GO:0005524
	Spst3g04720	809	FunFam	Putative receptor-like protein kinase	37	193	-	-
	Spst3g04720	809	Gene3D	Transferase(Phosphotransferase) domain 1	599	803	-	-
	Spst3g04720	809	FunFam	receptor-like protein kinase FERONIA	482	598	-	-
	Spst3g04720	809	CDD	STKc_IRAK	529	792	-	-
	Spst3g04720	809	FunFam	Receptor-like protein kinase FERONIA	217	401	-	-
	Spst3g04720	809	Gene3D	-	34	193	-	-
	Spst3g04720	809	Gene3D	-	217	401	-	-
	Spst3g04720	809	MobiDBLite	consensus disorder prediction	477	499	-	-
	Spst3g04720	809	SMART	serkin_6	523	791	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g04720	Spst-Chr3	98942028	98944457	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst3g04720	25	805	Receptor kinase-like Gene Family	AT5G61350	59.548	0.0	946

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Spst3g04720		Malectin_like	2.2e-37	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g04720	-		-	gmx:100814982	1262.28