Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04712 ATGGAAAATGGAATAATCCAGGGACCTTGGGGATTTCGCTCTCTGTCCAAATTCATATTGTGCACCATTTCTGGGGCCCTCACCGTCTGTTTTGCCATTGCTGGGGCCCTGACAGGAGCAATAGCTGGTGCTTTAGCAGCTAAGGCTACAAAGAGTGGTCTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGGTCTATACTCTCAGTGGAGGTGTTGGAAGCTTCCCGTGCATACTGGTGTATGGAGCAAACTGGCTCACGGGGTGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGGGGGAGGCTTGTTGAGGAATCTCTTACACCTGCCATTTTAACTGCATACAATTTACAGTTTGAGCAGGTTGGCATTGCTAACCCAGGCTATGATGAGATTCACGATGTTCATGGCTTAGTGGCACCCAGAGGATTGTCAGGAGATTCGTTGAAGAGGTTACCGCACCATATGATCTCAAAGGATATGAAGGCAGAGAATACTTGTTGTACAATATGTTTGCAGGATATTGAAGTAGGTGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCCTGTCCTGTGTGCAGACAGAATGTGTAA 651 0.4654 MENGIIQGPWGFRSLSKFILCTISGALTVCFAIAGALTGAIAGALAAKATKSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQFEQVGIANPGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMKAENTCCTICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04712 216 SMART ring_2 171 212 IPR001841 -
Spst3g04712 216 CDD RING-H2_NIPL1-like 170 213 - -
Spst3g04712 216 SUPERFAMILY RING/U-box 152 216 - -
Spst3g04712 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 216 IPR013083 -
Spst3g04712 216 ProSiteProfiles Zinc finger RING-type profile. 171 213 IPR001841 -
Spst3g04712 216 Pfam Ring finger domain 171 213 IPR001841 -
Spst3g04712 216 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 215 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04712 Spst-Chr3 98909978 98913277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04712 14 216 C3H Transcription Factor Family AT1G74410 56.863 7.55e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04712 - - gmx:100800105 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04712 3 98909978 98913277 Spst3g04712 3 98909978 98913277 ECH