Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04682 ATGGGAAATTGCTGTCGAAGTCGGTGCAAGATTGATGGCACTTTGAAGCCCCAACCTTGTTCTGATGTTATCGAAGTTCCCAGTGGAAGCACCCATTTGTTGGTTCATTCAAATCCAAACGGGTATGGATACAGTGATGAAGGTAAACCTGAGATTCTCCCCACTCCAAGATCTGAATGGGACATACTTTCATCCCCACATTTAAAACCTTTCACACTACATGATCTTAAGAAGGCCACAAGAAATTTTCAGCCTCATAATCTAATTGGAGAAGGAGGATTTGGTTATGTCTATAAGGGGGTGATTAATGATAGTAAATCCTTCGGAGATACAATTGCTGGATCCAGAACAGATGTAGCTGTGAAGAAGCTTAAGCCTGAAGGCTTTCAAGGCCACAAGGAGTGGCTGTCTGAAGTCAACTATCTTGGCCAACTTCACCATCCAAATCTTGTCAAACTTATTGGATACTGCCTGGAAGGGGATAACCGACTTTTAGTGTATGAGTACATGCCCAACGGATGCTTGGAAGATCATATATTTCGAAAGAGTGCACAAACACTTCCTTGGGCAACAAGAATCAAGATTGCCACGGGTGCTGCTCGAGGTCTCTCCTTTCTACATGATTCTAAGCAACAAATCATTTACCGAGATTTCAAGGCTTCTAATATTTTGCTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGATTGGCCAAAGCAGGGCCCACCGGAGACCATTCTCATGTTTCCACTCAAGTTCTGGGCACTCGCGGCTACGCTGCTCCTGAATATATTGCTACAGGTCGGTTGACTTCAAGATGTGATGTCTATAGCTTTGGGGTTATGCTATTGGAACTACTATCAGGGCGCCATGCTATTGATAACACGAAATCCGGAGTGGAACATAATCTGGTAGAATGGGCAAGACCCTATTTGGGTGATAGGAGGAAGTTGTTCCGGATTATGGACACCAAGTTAGAAGGGCAATACCCGCAGAGGGCAGCTTATACAGTTGCTATAATTGCTTTACAATGTATTTCTGAGGCCAAGAGTAGACCACAAATGTCTGAAGTTTTGGCTGCCTTGGAACACCTGCCAGCCATTAGACATTCATCTAGCCCGTCTAGAGAAGACAAACCCAAACAGAATCCCAAGAGAGAGGTTCTAAGTCCTGCAGCAAATTTCCCTTTGCGACATAACCATGCTCAACAAAAGCCAGAGTTGTGA 1230 0.4398 MGNCCRSRCKIDGTLKPQPCSDVIEVPSGSTHLLVHSNPNGYGYSDEGKPEILPTPRSEWDILSSPHLKPFTLHDLKKATRNFQPHNLIGEGGFGYVYKGVINDSKSFGDTIAGSRTDVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGYCLEGDNRLLVYEYMPNGCLEDHIFRKSAQTLPWATRIKIATGAARGLSFLHDSKQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDHSHVSTQVLGTRGYAAPEYIATGRLTSRCDVYSFGVMLLELLSGRHAIDNTKSGVEHNLVEWARPYLGDRRKLFRIMDTKLEGQYPQRAAYTVAIIALQCISEAKSRPQMSEVLAALEHLPAIRHSSSPSREDKPKQNPKREVLSPAANFPLRHNHAQQKPEL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04682 409 FunFam Serine/threonine-protein kinase BIK1 54 169 - -
Spst3g04682 409 MobiDBLite consensus disorder prediction 371 386 - -
Spst3g04682 409 Pfam Protein tyrosine and serine/threonine kinase 87 361 IPR001245 GO:0004672|GO:0006468
Spst3g04682 409 Gene3D Phosphorylase Kinase; domain 1 55 169 - -
Spst3g04682 409 Gene3D Transferase(Phosphotransferase) domain 1 170 388 - -
Spst3g04682 409 MobiDBLite consensus disorder prediction 370 409 - -
Spst3g04682 409 PANTHER OS01G0588500 PROTEIN-RELATED 61 366 - -
Spst3g04682 409 SUPERFAMILY Protein kinase-like (PK-like) 58 364 IPR011009 -
Spst3g04682 409 ProSiteProfiles Protein kinase domain profile. 83 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04682 409 ProSitePatterns Protein kinases ATP-binding region signature. 89 122 IPR017441 GO:0005524
Spst3g04682 409 CDD STKc_IRAK 89 366 - -
Spst3g04682 409 FunFam Serine/threonine-protein kinase PBS1 170 382 - -
Spst3g04682 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04682 Spst-Chr3 98627843 98631981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04682 69 366 Glycoside Hydrolase AT3G07070 51.656 7.49e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst3g04682 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04682 - - gmx:100791844 665.611