Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04672 ATGTTGAAGCTTCTGGTTAGTAGAGCAGCTAGTGTCTCACCTTCTCGCAACCACAATGGCGTTGCCGCATTCAGTTTGTATAGCTCTGAATTCATTTTTATAATATGTAGTAGGTGTGTTCATTCACTACAATTTGCGACTGTAGACGCAGAAGAGGTATCAGGTTCTAGGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGTTCTTCAAATTCGAATACAGTTGTGGATCCGTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTATCCAGCTGTCCCAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTATGGAGACATATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGAGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGCGGGGATCAGGTTCGTTTCTTAGCAAGATCATTTGCAGTACCCGGAAATCATCTTGGACAACAAAGTCACGGTTTTCGTTGGCCCTATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCTGTCCTTCAATTGATGGGTGCACTCTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTGCGTCTGCTTCACACCTGTGGCTTACCTGTTGAAGATGTAGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTGTTACTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAGAAGTTAGCCCTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACACTGCGTGGGTGTGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCTGCCCAATCATTATTATTTATGCACGAGAACTGGTCTAAAACATCCTTGCTGTCGAATTTAAAAGATCTTGCTGAAAGAAGAAAGTTGACAGACTTGACAATTGGTCCAGTCCTCACAGTTACGACTGATTCTATGCTTAAACATGTCAGTAAATTGCTTGAGATACCAGGATCAAAGCTGCTCTTCGGAGGTCGACCTTTGGAAGATCATTCAATTCCATCTATTTATGGTGCTATTAAACCAACAGCTGTTTATGTTCCTCTTGAGGAAATTATGAAGGATAACAATTTTGAACTTGTGACAAAAGAAATATTCGGACCCTTTCAGATTATTACAGATTACAAAAATAGTCAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTGACAGCTGCTGTAGTTTCGAATGATCCTTTATTTGTACAGGAAGTCATTGGCAAGACGGTAAATGGTACTACGTATGCTGGTTTAAGAGCAAGGACCACCGGAGCTCCACAGAATCATTGGTTTGGACCCGCCGGTGATCCTAGAGGTGCAGGAATTGGTACTCCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATTTTGGGCCGGTGTCAAAGAATTGGGAAATTCCTCCATCTACTTGA 1692 0.4125 MLKLLVSRAASVSPSRNHNGVAAFSLYSSEFIFIICSRCVHSLQFATVDAEEVSGSRPAEVLNLVQGKWVGSSNSNTVVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLALDLKGRVKLEDAGFDWKILGPDVHQEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSNLKDLAERRKLTDLTIGPVLTVTTDSMLKHVSKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDNNFELVTKEIFGPFQIITDYKNSQLSVVLDALERMHNHLTAAVVSNDPLFVQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDFGPVSKNWEIPPST 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04672 563 CDD ALDH_F12_P5CDH 63 551 - -
Spst3g04672 563 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 315 504 IPR016163 GO:0016620
Spst3g04672 563 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 39 563 IPR044638 GO:0004029
Spst3g04672 563 Pfam Aldehyde dehydrogenase family 74 505 IPR015590 GO:0016491
Spst3g04672 563 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 314 IPR016162 GO:0016491
Spst3g04672 563 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491
Spst3g04672 563 FunFam Aldehyde dehydrogenase 12 320 508 - -
Spst3g04672 563 FunFam probable aldehyde dehydrogenase 54 312 - -
Spst3g04672 563 SUPERFAMILY ALDH-like 63 531 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04672 Spst-Chr3 98517021 98526918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04672 28 563 Aldehyde Dehydrogenase Gene Family AT5G62530 81.378 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04672 K00294 - gmx:100806579 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04672 3 98517021 98526918 Spst3g04672 3 98517021 98526918 ECH