Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04671 ATGTTGAAGCTTTTGGTTAATAGAGCAGCTAATGTTTCAACTTCTCGCAATCACAATGGCTTTGCCGCATTCAGTTTGTCTAGGTGTGTTCATTCACTACAATTTGCGACTGTAGATGCAGAAGAGGTATCAGGTTCTAGGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTCGAATACAGTTGTGGATCCGTTAAATGGAGACTCATTTATTCAAGTTGCTGAAGTTGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTATGGAGACATATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGAGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGCGGGGATCAGGTTCGTTTCTTAGCAAGATCATTTGCAGTACCCGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCCTATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTTCTTCAATTGATGGGTGCACTCTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTACGTCTGCTTCACACCTGTGGCTTACCTGTTGAAGATGTAGACTTCATAAATTCTGACGGGAAGACAATGAACAAACTGTTACTGGAGATGATATTGGATCATGAAGTAGTATTGAATTTACAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAGAAGTTAGCCCTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACACTGCGTGGGTGTGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCTGCCCAATCATTATTATTTATGCACGAGAACTGGTCTAAAACTTCCTTGCTATCGAAGTTAAAAGATCTTGCTGAAAGAAGAAAGTTGACAGACTTGACAATTGGCCCAGTCCTCACAGTTACGACTGATTCTATGCTTGAACATGTCAATAAGTTGCTTGAGATACCAGGATCAAAGCTGCTCTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCTATTAAACCAACAGCTGTTTATGTTCCTCTTGAGGAAATTATGAAGGATAACAATTTTGAACTTGTGACAAAAGAAATATTCGGACCCTTCCAGGTATGGGAAGGGAGAATTATTACCGATTACAAAAATAGTCAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTGACAGCTGCTGTAGTTTCGAATGATCCTTTATTTGTGCAGGAAGTCATTGGCAAGACGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACAACCGGAGCTCCACAGAATCATTGGTTTGGACCCGCCGGTGATCCTAGAGGTGCAGGAATTGGTACTCCAGAGGCCATAAAACTTAATATCCTTCGAATTGCGCCTGTGCCTGTATCAGAGAAACAGCTTCTTTGTATATGCAAGGGTAACACAGTGTACAATGACCCTTTCCCGTATCTTGCGCGGAGCCTTTGGCGCTGGAATTTTGGTTACCGTCACATGACACTGCAGTTGCTAATCACAATTTCTGATCCATGTGTAGCTTTGACATCAACAGTTGCTTCAGTAGCCAATATGCTGAATCTTGCAATTTCAACCATGACTTTGTTAGAGGTAATCAAGGATGCTTCAATCAATTCAAAACCGCTTGATTTACCTTTGGATTACCCAATTGTTCTGAACCCAGATAGTATCTTACCCAATTTAAAGCCAAAAGATATAGATGAATCTTCTTCATCACTCATAAAGCCCCTTATCGGATGGAATGTTCCGCCAACTGATGCTGAGATCACTGACATTAACAAAAAGTTCTTTACACAGCTGAATGCTAAGTTCATGAACACTAATAATTTGGATAAGGGTGAGTTTATTAGTAGTTTGAAGTCTTATCTAGAAAACATCAGGGACAAAGTAGGGGTTGTGATTGAGGTCGATACGTCCAGTAGTGATTATAACAGGATTTTGATTGATAAGCTTGGAACATTCGTGGGTAAAGATGTTGCTGGCCTGGTATTGAATGGGTGTGTATCTTTGGAGATTTGGGACGTGATTGAGGCTTTGATTGTTAATGTTACTATTGAGCATTCTTGCTATTCAAACCTGATTACCAAATTAGTGGAAAAAAGAGATGCTTATGACAGTATGGTAACTGTGAAGCTGGAGTGGGAGAGCCAAGCAGTGTTAGCCATTGAGACAGCAAGTGATAGCAAGCTGAAGACGAAGAAATTGGTTATGGCAAAGGAGGCTTCCATTTTGCTTATGATGGCATATGATGGTTTCTCTGCGTCTGAGACTTGTTTGCATTATCTGATTGCTTCATCCAACATCAATGACGTGGTGCTATCCCCTTCATTCGGTAAGTTGAATGGAAAAGAATTACTAAATTTGATTCGCTATTTAGCCAAATGGTTGAAGAAATACCAGAGGTTTCCACAAGCACGACCATGTCCGAGAGCCTCGTCGGTTTTGAATTTGAAGGCTTGCGATTGGGTTCCTAAACTCGAAGATGTTATAAAATATCTTGGCTTGGTGCTTGATGAGAAATTTTCGTCATTGGTGTTACATCCATTGTTTCACGAGGAGCTGAGATCAATTGAAGAAATGGTTAGTTGTTTAACTTCTGAAGCCAAATTTTGTAACTTAATGGCTGATGTAATCGACATACTAAAGATCGATCGTGAAAATTTGTAA 2961 0.4043 MLKLLVNRAANVSTSRNHNGFAAFSLSRCVHSLQFATVDAEEVSGSRPAEVLNLVQGKWVGSSNSNTVVDPLNGDSFIQVAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEMILDHEVVLNLQANPRMTLFTGSSRVAEKLALDLKGRVKLEDAGFDWKILGPDVHQEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDNNFELVTKEIFGPFQVWEGRIITDYKNSQLSVVLDALERMHNHLTAAVVSNDPLFVQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLNILRIAPVPVSEKQLLCICKGNTVYNDPFPYLARSLWRWNFGYRHMTLQLLITISDPCVALTSTVASVANMLNLAISTMTLLEVIKDASINSKPLDLPLDYPIVLNPDSILPNLKPKDIDESSSSLIKPLIGWNVPPTDAEITDINKKFFTQLNAKFMNTNNLDKGEFISSLKSYLENIRDKVGVVIEVDTSSSDYNRILIDKLGTFVGKDVAGLVLNGCVSLEIWDVIEALIVNVTIEHSCYSNLITKLVEKRDAYDSMVTVKLEWESQAVLAIETASDSKLKTKKLVMAKEASILLMMAYDGFSASETCLHYLIASSNINDVVLSPSFGKLNGKELLNLIRYLAKWLKKYQRFPQARPCPRASSVLNLKACDWVPKLEDVIKYLGLVLDEKFSSLVLHPLFHEELRSIEEMVSCLTSEAKFCNLMADVIDILKIDRENL 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04671 986 SUPERFAMILY ALDH-like 53 537 IPR016161 GO:0016491
Spst3g04671 986 Coils Coil 976 986 - -
Spst3g04671 986 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 339 350 IPR016160 GO:0016491
Spst3g04671 986 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 322 513 IPR016163 GO:0016620
Spst3g04671 986 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 316 IPR016162 GO:0016491
Spst3g04671 986 FunFam Aldehyde dehydrogenase 12 322 515 - -
Spst3g04671 986 Pfam Aldehyde dehydrogenase family 65 511 IPR015590 GO:0016491
Spst3g04671 986 FunFam probable aldehyde dehydrogenase 44 314 - -
Spst3g04671 986 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 547 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04671 Spst-Chr3 98503594 98514408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04671 1 545 Aldehyde Dehydrogenase Gene Family AT5G62530 77.007 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04671 K00294 - gmx:100806579 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04671 3 98503594 98514408 Spst3g04671 3 98503594 98514408 ECH