Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04657 ATGGAAATTGGGACTGTAGCATGGATTTCCTTGGTGATTATGGTGACAGTTTTCTGCCCTTCGTCATTTGCTCTCACCCTGGATGGTCAGGCGTTGCTGGAAATCAAAAGTAGTTTGAATGATACTAAGAATGTTCTGAGCAACTGGCAAGAGTTTGATGAGTCTCATTGTACATGGACTGGTATCTCTTGTCACCCTGGTGATGAACAAAGAGTGCGGTCAATAAATCTGCCATACATGCAACTTGGAGGAATTATCTCTCCCAGCATTGGTAAACTCAGTAGACTGCAAAGATTGGCATTTCATCAGAACAGCTTGCACGGAACCATTCCTAATGAACTTACCAATTGTACCGAGCTAAGAGCACTGTACTTGAGGGGTAATTTTTTGCAAGGAGGGATACCGTCAAACATTGGAAATCTTTCATATTTAAATATACTGGATTTATCAAGTAACTCGTTAAAAGGTGCTATACCTTCCTCCATTGGCCGTCTCTCACATTTGCAAATTCTGAACTTTTCTACGAATTTCTTTTCCGGTGAAATTCCCGACATTGGAATACTAAGCACCTTTGACAAGAGCTCGTTTAATGGAAATTTAGACCTTTGTGGGCGGCAAGTCCAAAAGCCATGTCGGACATCATTTGGTTTCCCTGTGGTGCTGCCCCATGCTGAAAGTGATGAAGCTGCAGTCCCTACCAAAAGGTCTTCCCATTACATGAAGGGGTTGCTAATTGGTGCAATGGCAACTATGGGTCTCGCACTTGTCATAATCCTTTCATTCCTCTGGACTCGTTTGTCATCGAAGAAGGAACGAGCTGCGAAGAGATACACTGAAGTCAAGAAACAAGTTGATCCAGAAGCAAGCACAAAACTTATTACCTTCCACGGTGATCTGCCATACACATCATCCGAGATCATAGAGAACCTGGAGTCTCTTGATGAAGAGCATATAGTAGGATCAGGTGGATATGGTACTGTTTACCGAATGGTGATGAACGATTGTGGTACATTTGCTGTTAAACGGATTGATCGAAGTTGTGAAGGGTCTGATCAAGTGTTTGAAAGGGAGCTAGAGATCTTGGGGAGCATCGAGCACATAAATCTAGTAAATATGCGTGGTTACTGCAGGCTTCCTTCTTCAAGGCTCCTTATCTATGACTATTTGGCCTTAGGCAGCTTAGATGATCTCTTGCATGAAAATACTCAACAAACACGACTACTGAACTGGAGTGATCGTCTACAGATAGCTCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCACCACGAATGCAGCCCAGCAATTGTTCATCGTGACATAAAATCTAGTAACGTCCTCCTTGATGAAAACATGGAGCCACATATATCTGATTTTGGCCTTGCAAAGCTTTTAGTTGATGAAGAGGCCCATGTTACCACAGTGGTAGCTGGCACATTTGGTTATTTGGCACCGGAGTATCTACAAAGTGGGAGAGCAACTGAGAAGTCAGATGTATACAGCTTTGGAGTTCTATTACTCGAACTTGTGACTGGAAAGAGGCCAACAGATCCTTCCTTTGGTAAAAGAGGTTTAAATGTTGTTGGTTGGGTGAACGCATTACTGAGAGATAAAAGATTGGAGGACGTGGTGGACAAAAGATGCAGTGATGCAGATGCAGGAACGCTTGAAGTAGTTCTTGAGCTGGCAGCAAGATGCACAGATGGAAATGCAGATGATCGTCCATCAATGAACGAGGTGTTACAGTTGCTGGAACAAGAGGTTATGTCTCCCTGTCCAAGCGAGTTTTATGAGTCTCATTCAGATCACTGA 1809 0.4345 MEIGTVAWISLVIMVTVFCPSSFALTLDGQALLEIKSSLNDTKNVLSNWQEFDESHCTWTGISCHPGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLAFHQNSLHGTIPNELTNCTELRALYLRGNFLQGGIPSNIGNLSYLNILDLSSNSLKGAIPSSIGRLSHLQILNFSTNFFSGEIPDIGILSTFDKSSFNGNLDLCGRQVQKPCRTSFGFPVVLPHAESDEAAVPTKRSSHYMKGLLIGAMATMGLALVIILSFLWTRLSSKKERAAKRYTEVKKQVDPEASTKLITFHGDLPYTSSEIIENLESLDEEHIVGSGGYGTVYRMVMNDCGTFAVKRIDRSCEGSDQVFERELEILGSIEHINLVNMRGYCRLPSSRLLIYDYLALGSLDDLLHENTQQTRLLNWSDRLQIALGSARGLAYLHHECSPAIVHRDIKSSNVLLDENMEPHISDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFGKRGLNVVGWVNALLRDKRLEDVVDKRCSDADAGTLEVVLELAARCTDGNADDRPSMNEVLQLLEQEVMSPCPSEFYESHSDH 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04657 602 Gene3D Phosphorylase Kinase; domain 1 271 388 - -
Spst3g04657 602 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 585 - -
Spst3g04657 602 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 389 595 - -
Spst3g04657 602 Gene3D Transferase(Phosphotransferase) domain 1 389 593 - -
Spst3g04657 602 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Spst3g04657 602 SUPERFAMILY Protein kinase-like (PK-like) 294 584 IPR011009 -
Spst3g04657 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Spst3g04657 602 Gene3D Ribonuclease Inhibitor 26 213 IPR032675 -
Spst3g04657 602 SMART serkin_6 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04657 602 SUPERFAMILY L domain-like 27 189 - -
Spst3g04657 602 Pfam Protein kinase domain 315 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04657 602 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Spst3g04657 602 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Spst3g04657 602 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04657 Spst-Chr3 98418820 98422638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04657 7 592 Receptor kinase-like Gene Family AT2G35620 48.294 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Spst3g04657 Pkinase 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04657 - - gmx:100803920 1122.07