Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04649 ATGGGGCACAAAAAGCGAAACACTGCCGCGCGCTCGAAACAAGCCGCGGCGGCTTCTCCGGCGGCGCAATCCGGCGTCGGCGGAGCCGCCAACGGTGCCGTATCGCCGGACGCTGACGCGTGCAAAGTTTCCGATCACAATCCGCATAACCCTAGGAAGATCGAATTGACTCCGCCCCAATCCGAGGGTTCCGATTACTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTCCGTCGCGGGAACCATACGAAGGCAATGAAGCTGTTGCGGGAGATTTGCGCCAGAGAGGAGGGCTCGCCTTACTGCGCGTTCGTTCACCGAGTGCACAGCCTCATGTGTTTCAAAACGGCGACGGTTATCACCGACCCGAGCTCGAAGCAACGGCATTTGAAGAACGCGCTCGAGTCGGCGCGCCGCGCGGTAGAGCTCATGCCGAATTCCGTTGAGTACGCGCATTTCCGTGCCACGGTGATGTTGGAGGCGGCGACTGAAGGGAAGGATTACGAGGAGGTGGTGCATGAGTGCGAGAGGGGGCTCGCCATCGAGAACCCCAGTGATCCTGCCAAGGAGATGTTGCAGGATGAGAGCGAGCAGAAGGCATCATCTCCCGAGGAGCGCATTGCGAATGTGCAGAATGAGTTGAGGCAGCTTATTCAGAAATCGAATATAGCTTCCTTGTCATCTTGGATGAAGAATTTAAGTAATGGGGAGGAGAGATTTCGGTTGATTCCGATAAGGAGGACCCCCGAGGACCCCATGGAGGTGAGGCTGGTTCAAGCTAAAAGGCCTAATGAGATCAAGAAGGTGAGCAAGACGGCCGACGAAAGACGGAAGGAAATTGAAGTTCGAGTGGCTGCTGCTAGGCTGTTGCAACAGAAGCCAGAGGCACCGCAGTCTCCCAATGAAGGAGATAGGGATGACAAACCATTGGATTCATCTGCAGGCTCTGGTCAGAAGACAGGTGATAGGAAAAGGCACGGAAATGTGAAGAAGAGTGGCTTGACACCTGAGAAGATGAAATGGGTGCACTCATACTGGAATTCGGTTAGCATGGATATGAAGAAGGATTTTCTTAGGGTTAAAATTTGTGATCTTAAGTCGCACTATGGGTCTTCAAAGGATACTTTACCGAATGATATATTGTCAGAGGCTTTGTCTTATGCTGAGGCCAATAAAACTTGGAAATTCTGGCCTTGCTGCAACTGTGAAGAGAAACATTCCAACCCGGATTCTCACAGGCACCATGTTGTGCAGGAGCATATGGGGAGTCTTTCACCACAAATGCAGAGACTTCTGCCCAAAAATGTTGACAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTCTGGATGTCTTAGCTGCAGCTAGAATGCTCGATAATAAAGCCAGGTTCAAAAGTCCATCACTTCCGGAGGATTTGTATTTCGATCATCATACTCTTGACTACAATGATTGTTTTAAAGAAGCAAGCAGCTCTTACACTGAGAAGGAAAGTTCAGGGGACACTCTTCGTAATTGTTTGGAAGAATGCAATAACCATTGTAAAATTGTAGAAAATGATATAAGAGAAGGTGTTGAAGACCAACTATCTATGGTTAATCCCATTATTGATTGTTGGCCAGTATCTGACGACCCTGAGCGTGCAAAACTTCTGGGGAAAATTCATGCCATGTTTGAGACTCTTATTAGGCACAAATGTCTTGCCGCTAGTCATTTGAACAAGGTCATACACTTTACTATGGGTGAGGTACAGGGTCTTGCTGCTGGTTCTCAACTTCTAAGTCATGGCGTGGACCAAACACCAATGTGCATATGCTTTCTGGGAGCATCACAGCTTAAGACAATTTTCCAATTTCTTCAGGAAATATCTCACGCATGTGGGTTGGCCAGAAATGCCGATAAAGGTAGTAGTCCCACAAATGATTTGCTGAATATCAGTCAAGGTTCTGAGATTAAAGACAAGATTGTACTTGATGGAGATGCATCACGCCTCCTACTGGATGAGTGTTTACTGCAAACGCAAGTCACTGCTGGTACACCTCAGGGGTCTGTCTTAGATGATGTCACCACCCCAAGCTCCTCTGATGGAATTTCATGCGATAATGATGCTTTGCTATCCTGGATATTATCAAGTTCCCCTGTTGGGGATCAATTGACATCATGGCTGCGGATCAGAGAAGATAAAATAAATAAAGGAAAGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTACCACCTACAGGGCCTATGTGAGAAAAAGGGTGAGCGTATAAGTTATGAGGAAGCACTGCAAACAGTAGAGGATCTTTGTCTTGAAGAAGGTAAGAAGAGGGAGACTGTTGGGGAATTTGTCCAGCGAAGCTATGAATCTGTCTTAAGAAAGCGAAGAGAAGAGCTCATTGAGAGTGAGAATGATATGATGTATGTCAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCAAGGAATGTCAATCAATTTGGTTATGATGAAACTTATGCTGGTGTGACTTCTCAATTATGCGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGAGTACTTGCATCAAATGGATGGCTGTATAGAAAATGCTATTCAGAAACTGAAGGAGCATTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAGTCAGAAGTGTCACAGAGATGCAGCAATTGGAATTCAAGCTTGGGCCTATTTCTGTTAATGATTATCGAGCAATATTAGTGCCTCTAGTGAAGTCTTACCTAAGGGCCCTTTTGGAAGATTTGGCTGAGAAGGATGCAAGAGAGAAGTCTGATGCTGCAAGTGAAGCATTCTTGGCTGAACTTGCTCTAGATTCCAAGAAGGCTGTTAAAGGGGGAAGTGAGAGCACAAAACATGCTGAGAAAACAAAAGATAGGAAGAAGAATAAAGATCACAAGAAAGCAAGAGATTTGAAGGTCACGGGTGATCATGTGCAGTTCTCAGTGGGATCTACAATTCCTGATTCCAATCTAGTTGCACCTGAAAGTGACTCCCCAGATCATGAGTCTGTTTCTGTGAACGATGGTGATTTAGAACAACTTGAAGAGGAATTTAGACGTAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAATTCCAACGTAGGATAGAAAATGAAGCCAAACAGAGGCATCTTGCCGAGCAACAAAAAAAGTCATCTGGGTTGTACTTAGAAGTGGTAGAGAATCTTCAAGATTGTCAAAGAAAGGTCGAAACTGATTCATCAGATTCATACAAGCGTGACCAGTTAGTACAGGAGAATGGAACCCGAGGCAATCTGGATGGTGTGCTTTCGCCCACAACAAATGGTTCCATTTATTTGCATCAATCAAAACTTAAACAATCAGATTTGCCTAATGGAGTTGTTCAAGACAATGGGCTACCTGTGTCTGATCGGCGTGCTGGAAAAAAACATAAACGCCGGAATTCTTCTAGACCTGTTGATGGAAAGATTGAATCTTTTTCATCCGAAAAAGAGAATACCGAGGATACACATTCTGATTCTCACTTGAGAGAGCAAATCAAATTTAATAACAATCAAGACGCAAATAATGTGTGGGAAAACAATGGATCAAATGTGTTGAGAGAGTTGCCAGTAGAAGATGCAGAGGAGGAAAGATTCCAGGCGGATCTTAAAATTGCTGTACGCCAAAGCCTGGACACGTTTCAAGCTCGGGAAACTTTGCCTTTGGTTTCCAGTTTAAGAATGTCCCAGAGGGCTTCTTCAAAGGTAGATAGTGTTGATTGCTCGCCTGTAGAAGACCAAACTGATAATGTGAATGGGGCTACTTTGCTTGGTACTGGACTGAAGAATGAAGTCGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGAACAGAGCATGATCATGTGGGTGATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTACTGCACTGGACATTGCATCAAAGGATTCAAGGGGAGAAGCAGTTGCACCGACATCCCTGCGGATAGCTTTAAGTAATCTGTATCCCCACAGTAATTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTTGCAGTGATATTTGACTGCCTTCATAGATCATGTACTCGTGGTTCAAGTGTTTGCGTCACAGAATCAGCGGAAAGCAACCACGGCATGGGATCCTGGGATTGTGCAAATGGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTACTGAACAAATGAACTGCAACCATTGTCATCGTGAATCCAGATATATGAAATATACCTCCTTCTTTCACAATATAAATGCCAGTGCTCTCCGTGATATGAAGGAAAAGTCTTCTGCAAGTTTCTTCGATAATCTTTTGAATCTTGTGGAAATGAACCATCAGTTGGCTTGCGATCCAGAAGCTAATGGCTGTGGCAAGCTGAACCACATCCATCACTTTCTTAAAACTCCACCCCATGTTTTTATGACAGTCCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAAAAGCAACTTTGGCAGCCCTGAGCACCACGATTGATATCAGTGTCCTTTATGGTGGTTTAAATCTTAAATGCACCCATAACTTGGTTTCAGTGGTTTGCTACTATGGTCAGCATTATCACTGCTTTGCTTATAGCCATGACCATGAACAGTGGATTATGTACGATGACAAGACGGTAAAGGTAATTGGTGGATGGGCGGATGTTCTTACAATGTGTGAAAGAGGACATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGCTTTAAATAGAAGCAGTATTATCGGGGGAACATATAGCATATGTATGTCAGTTGTCGAAGAAATTTTCCTCCCCTCCCCGTCCCCCTCCCCAAAAACAGAAAAAGGGTTATGTATAGTTCTCACACAATTAGATTTGTCAAAATGTCAGCTTCGTGTCACTTCAGCTGTAAAAGGAGTGTCGTTTACTGATCTACTGGACTACTATCCTCCTTTCAAGATACCTTGTTGGAACGTGCCGCATGGCAGATTTTGTGCAACAGTAAATTCAGGAGCTTCCATCTTTTGGATCCACAACACTGTACTCTATTTTTGTTTACTTTTTGCGGTGTGGGATGGGATCCGTAACTTGAGTATGATTCAAGGTAATTAA 5256 0.4408 MGHKKRNTAARSKQAAAASPAAQSGVGGAANGAVSPDADACKVSDHNPHNPRKIELTPPQSEGSDYSTIKLECERALTTLRRGNHTKAMKLLREICAREEGSPYCAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARRAVELMPNSVEYAHFRATVMLEAATEGKDYEEVVHECERGLAIENPSDPAKEMLQDESEQKASSPEERIANVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRTPEDPMEVRLVQAKRPNEIKKVSKTADERRKEIEVRVAAARLLQQKPEAPQSPNEGDRDDKPLDSSAGSGQKTGDRKRHGNVKKSGLTPEKMKWVHSYWNSVSMDMKKDFLRVKICDLKSHYGSSKDTLPNDILSEALSYAEANKTWKFWPCCNCEEKHSNPDSHRHHVVQEHMGSLSPQMQRLLPKNVDNEWIEMILNCSWKPLDVLAAARMLDNKARFKSPSLPEDLYFDHHTLDYNDCFKEASSSYTEKESSGDTLRNCLEECNNHCKIVENDIREGVEDQLSMVNPIIDCWPVSDDPERAKLLGKIHAMFETLIRHKCLAASHLNKVIHFTMGEVQGLAAGSQLLSHGVDQTPMCICFLGASQLKTIFQFLQEISHACGLARNADKGSSPTNDLLNISQGSEIKDKIVLDGDASRLLLDECLLQTQVTAGTPQGSVLDDVTTPSSSDGISCDNDALLSWILSSSPVGDQLTSWLRIREDKINKGKEIVQMLEKEFYHLQGLCEKKGERISYEEALQTVEDLCLEEGKKRETVGEFVQRSYESVLRKRREELIESENDMMYVSNRFELDAISNVLQEAEARNVNQFGYDETYAGVTSQLCDLESGEEDEWRMKEYLHQMDGCIENAIQKLKEHLSIELSKIDARIVRSVTEMQQLEFKLGPISVNDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGSESTKHAEKTKDRKKNKDHKKARDLKVTGDHVQFSVGSTIPDSNLVAPESDSPDHESVSVNDGDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQRHLAEQQKKSSGLYLEVVENLQDCQRKVETDSSDSYKRDQLVQENGTRGNLDGVLSPTTNGSIYLHQSKLKQSDLPNGVVQDNGLPVSDRRAGKKHKRRNSSRPVDGKIESFSSEKENTEDTHSDSHLREQIKFNNNQDANNVWENNGSNVLRELPVEDAEEERFQADLKIAVRQSLDTFQARETLPLVSSLRMSQRASSKVDSVDCSPVEDQTDNVNGATLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRTEHDHVGDPCVVCALYEIFTALDIASKDSRGEAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHRSCTRGSSVCVTESAESNHGMGSWDCANGSCIAHSLFGMNITEQMNCNHCHRESRYMKYTSFFHNINASALRDMKEKSSASFFDNLLNLVEMNHQLACDPEANGCGKLNHIHHFLKTPPHVFMTVLGWQNTCESADDIKATLAALSTTIDISVLYGGLNLKCTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWADVLTMCERGHLQPQVLFFEAALNRSSIIGGTYSICMSVVEEIFLPSPSPSPKTEKGLCIVLTQLDLSKCQLRVTSAVKGVSFTDLLDYYPPFKIPCWNVPHGRFCATVNSGASIFWIHNTVLYFCLLFAVWDGIRNLSMIQGN 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04649 1751 Gene3D Cysteine proteinases 1281 1628 - -
Spst3g04649 1751 Gene3D Tetratricopeptide repeat domain 47 220 IPR011990 GO:0005515
Spst3g04649 1751 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1296 1629 IPR028889 -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 1097 1127 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 1002 1016 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 302 337 - -
Spst3g04649 1751 Coils Coil 1035 1072 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 967 1036 - -
Spst3g04649 1751 Pfam Ubiquitin carboxyl-terminal hydrolase 1297 1606 IPR001394 GO:0004843|GO:0016579
Spst3g04649 1751 CDD Peptidase_C19 1387 1627 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 185 206 - -
Spst3g04649 1751 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1628 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 1110 1127 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 1174 1198 - -
Spst3g04649 1751 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 1145 1198 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 1 65 - -
Spst3g04649 1751 Pfam Protein of unknown function (DUF629) 345 878 IPR006865 -
Spst3g04649 1751 SUPERFAMILY Cysteine proteinases 1296 1627 IPR038765 -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 191 205 - -
Spst3g04649 1751 MobiDBLite consensus disorder prediction 291 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04649 65 1630 C2H2 Transcription Factor Family AT3G47890 54.796 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04649 - - gmx:100799759 2737.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04649 3 98285044 98293615 Spst3g04649 3 98285044 98293615 ECH