Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04622 ATGGTCCAAAGATCCAAAGGAACTAAGCCTCAGGAGGTTACAGTTACATTGCTGTGTGAAACTCCATGTCCGGGTTTGATTGATCATGGGAATCTAGTTAAACCACTACCACAGGTATCTTCTCAGCCATGTCCAGTTTCAGCATCTTTGGCACCGACTCAACACCAGCCACCACCTCCACTTCCATCACCACCACAAACGTCACCAATGATTTTTGAGAAGAAAACTCTACTAACATCACCATCACCAATGAATGTTCCAAAAGCACCATCTTTGCTTTCATCTCCTATCATGGATAGTGAAGGTGTGGTGTCACCGCCAAAGGTAAGCGGTTTTGCTTCATTGTTAAAACCCCCATTACTCCCTAAAGAGAAAGCAAAAAACACCACAGAGGGTACGGTAGGGGAGAGCTCAAGAGGGAATGGTGCAAACCGAACTAGGTTGAAGCCTCTATATTTGTATAAGGTTGTAGCTAATGTAGACCATTCAACTGTGTGGGATCAGATCAGTGATGGCTCATTCAGATCTCTTGCAATTTCTCGCAAAGGAATCCTGGATGCACTCCAAGATGGCCAAGGACTCAGTGCTGAGACACTTGAAAGACTCACCAGAATAGCTCCTACTCAAGAAGAAGAAGCGAAACTAATCCATTTCAGTGGAAATCTAGATAAACTTGCTGATGCTGGGTCATTCCTCTACCACATCCTGAAAGCAGTTCCGACGGCATTCATTCGTTTGAGCCCTTCTTTTCAGATGGAGCTACGATTGCGAAGTTATTCAACTTAG 786 0.4453 MVQRSKGTKPQEVTVTLLCETPCPGLIDHGNLVKPLPQVSSQPCPVSASLAPTQHQPPPPLPSPPQTSPMIFEKKTLLTSPSPMNVPKAPSLLSSPIMDSEGVVSPPKVSGFASLLKPPLLPKEKAKNTTEGTVGESSRGNGANRTRLKPLYLYKVVANVDHSTVWDQISDGSFRSLAISRKGILDALQDGQGLSAETLERLTRIAPTQEEEAKLIHFSGNLDKLADAGSFLYHILKAVPTAFIRLSPSFQMELRLRSYST 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04622 261 Gene3D Formin, FH2 domain 168 252 IPR042201 -
Spst3g04622 261 MobiDBLite consensus disorder prediction 122 142 - -
Spst3g04622 261 PANTHER FORMIN-RELATED 175 247 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst3g04622 261 MobiDBLite consensus disorder prediction 39 69 - -
Spst3g04622 261 Pfam Formin Homology 2 Domain 175 246 IPR015425 -
Spst3g04622 261 SUPERFAMILY Formin homology 2 domain (FH2 domain) 57 248 - -
Spst3g04622 261 MobiDBLite consensus disorder prediction 52 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04622 Spst-Chr3 97989288 97990950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04622 137 247 FH2 protein (formin) Gene Family AT1G70140 33.750 1.30e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04622 - - gmx:100819989 169.088