Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04621 ATGGCTATCGCCGGCGAAATTTTCCGGCACAACTTAACGGAATTTCTCGACGAGTCCCCTCAGCTTCACGTTCTTGCCGTTGATGATAGCCTCGTTGATCGCAAGGTCATTGAACGGTTGCTCAAGATTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAACGCGTGCTCTTCAGTATTTGGGCTTGGACGGAGAGAACAGTTCTCTCGGGTTTGATAGTGCGAAGGTTAATCTCATAATGACGGATTATTCCATGCCGGGAATGACAGGATATGAATTACTCAAGAAAATCAAGGAGTCTTCTGTCTTTAAAGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGGTGCCTAGAGGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTCAAATTGTCAGATGTAAGACGTTTAAAAGATTTCATCATGAAAGGGAAAGTGAAGGAAGGGGAGAAAAGATCTCTCAAACGAATGCGGTCAATTGATGGCAGTCCCCCTCTATCTGCAACATGCTCACCCATCTCTCTTCCATGCGATCCATCACCATCATTACTCTCTCCATTATCCTCAAAGAAGGCTAGATTGTGA 609 0.4516 MAIAGEIFRHNLTEFLDESPQLHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGENSSLGFDSAKVNLIMTDYSMPGMTGYELLKKIKESSVFKEIPVVIMSSENVLTRIDRCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKEGEKRSLKRMRSIDGSPPLSATCSPISLPCDPSPSLLSPLSSKKARL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04621 202 SUPERFAMILY CheY-like 21 153 IPR011006 -
Spst3g04621 202 CDD REC_typeA_ARR 24 145 - -
Spst3g04621 202 Pfam Response regulator receiver domain 24 143 IPR001789 GO:0000160
Spst3g04621 202 MobiDBLite consensus disorder prediction 160 202 - -
Spst3g04621 202 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 158 IPR045279 GO:0009736
Spst3g04621 202 Gene3D - 22 176 - -
Spst3g04621 202 ProSiteProfiles Response regulatory domain profile. 23 150 IPR001789 GO:0000160
Spst3g04621 202 SMART REC_2 22 146 IPR001789 GO:0000160
Spst3g04621 202 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04621 Spst-Chr3 97985870 97987737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04621 19 165 Response Regulator Gene Family AT3G48100 76.510 1.35e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst3g04621 Response_reg 3.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04621 K14492 - gmx:100796843 309.686