Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04607 ATGTTATGCAAATTTGAATACCCAACACCGCCGCATACCCTTATCTTTTTTATTCCCTCGCCCATGTCGCTCAAGCGCCGCCCCGATGATGGCAAGACTCCAGACGACAAGCGGAGGAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTGCAATCACTCGGACATTTGCTGGAGCCAATTCTAGAGCCATTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAAGCAGCCCTAAAGAGGCATTTAACCAGCATGAAACAGACCTGTGGAAAGGAGTTGCATACTACCGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGTGGTCGGATTGAAGGAGAGGATGGTTCCAACCTAAGAATAAGTTTAGTTGATGGCAAAACAGGGGAGGTTGTCTGTACAGGACCTGAATCGTTGGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGTCTGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAACCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAACACCATCCTCCTAGTCTGTCTGATGAAGTTTGGAGATTGGAGAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTGGGGAGTTTCTCACACTTCTCAATCTGGATTCAGCAAAGCTTCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACATGTGTACTTGATACAAGTAGACACGTGTACTTCCCTTCTAATTCTCAAGAACATGGTGTGGTCTTCAATGCTGTGGGTGAAGTGACTGGACTCCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAACACAGTTGCTACTGCATTAAGACAAGGGGAGAAATATGCAACTTTCGAAGATGAAGATTCTCTCATGCTTGGGTCTTCACACTTAACTAACGTACTTCACTCCCCAAGCTCTCCCAAGACCGAGGGATCTAGTGCCAACAAGCTTTTGGGTCCCCAAAAGTCTGGAGGATTCAATTACCCACAAGCAAGTGCCTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTCGACAGCATGGGCCTTGGATATGATCAGACCCTCAGTTTCCCAGTCCAAGTCTCGAACTCTTTGATCTGTGACACTGATTCAATAGCTCATGCTTTTAGTAATGAAGATCATCTGCAGTTTTTTGATAATGATCTTCAATCTCACGTTCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCTGGCACGTTCTACAGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAGGTATGCAACGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACCAAATAAAGGTAAGATTGTGA 1704 0.4413 MLCKFEYPTPPHTLIFFIPSPMSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGKTGEVVCTGPESLAKVEIVVLEGDFEEESDIWMSEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKILTVGEFLTLLNLDSAKLRSILGTGMSAKMWEVTVEHARTCVLDTSRHVYFPSNSQEHGVVFNAVGEVTGLLSECEYVTVDKLSETEKVEAQNTVATALRQGEKYATFEDEDSLMLGSSHLTNVLHSPSSPKTEGSSANKLLGPQKSGGFNYPQASASSPDIMSSIYSVGGTSSLDDYCLPNFDSMGLGYDQTLSFPVQVSNSLICDTDSIAHAFSNEDHLQFFDNDLQSHVQADLQSAVDSFMLARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIKVRL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04607 567 Pfam Calmodulin binding protein C-terminal domain 334 391 IPR046829 -
Spst3g04607 567 MobiDBLite consensus disorder prediction 25 44 - -
Spst3g04607 567 MobiDBLite consensus disorder prediction 411 430 - -
Spst3g04607 567 PANTHER OS02G0177800 PROTEIN 37 481 IPR012416 GO:0005516
Spst3g04607 567 Pfam Calmodulin binding protein-like N-terminal domain 104 249 IPR046831 -
Spst3g04607 567 Pfam Calmodulin binding protein central domain 261 327 IPR046830 -
Spst3g04607 567 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04607 Spst-Chr3 97864959 97869801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04607 22 374 Calmodulin-binding Proteins AT5G62570 60.833 1.03e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04607 - - gmx:100793156 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04607 3 97864959 97869801 Spst3g04607 3 97864959 97869801 ECH