Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04600 ATGGTTGAGTGCTTTGACGTGGGTCTCTCCACTATAGGTAAAGCAGCCATAGAGAGAGGAATGAACCACTTCGTCTTCGTTGTCTACTCCAACGCCCTTGCTACCCTCATACTCCTCCCTCTCACTTTTTTCATCAACAGTATAACTGTCATGCAGAATTGTGTTTTCACGGCCATTGACTACAGCTCTCCCACTCTTGGATCCGCTATGAGCAATTTGACTCCAGCAATCACTTTTGTGCTAGCGGTCATCCTCGGGATGGAGAAGTTGAATGTTGGAAGCTCTATCAGCCAGATCAAGGTCATGGGCACAGTGCTATCCATCTCTGGAGCATTACTCGTGACCTTTTACAAGGGCAGTGCCATCACCAGCTTTCGAATTGCACACTCTCTGTCACAACCATTGCCATCTTTGTTGGCTCAAACCAGTAACTGGGCCATTGGGGGCCTCTTCTTTGCCGCTGCTTCCATCTCTCTTGCACTCTGTAATATTACTCAGGCAGCAATTCTTAAAGGATATTATTCATCACAGTCAACCATAGTAGCCTTCTATTGCCTGTTTGGAACTGTCCAAAGTGCAATACTTGCTTTCATTGTAGTCAGGGATCCAAATGACTGGAAAATAAGCCTCGACATTGAGCTCATCTCTATAATCTATTCAGCTATTGTCGGAAGTATTCTGACATTTTCAGTAATGACTTGGTGCATAAAAAGGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGAGCATCGCCATTGCAGCCTTTTCGAGTGTTCTCTTCCTCGGTGAAACGCTTCATGTCGGCAGTGTCCTAGGCGCAGTGATAATCGCCATCGGATTTTACGCAGTAATTTGGGCACAATCCAAAGAGGCAAATGCAAAAGACCTCCAAATTGATGGACAATCATCCCCATCTTCCCAGGCGAGTCCTCTACTGCAGACAGTCCCGTGA 957 0.4598 MVECFDVGLSTIGKAAIERGMNHFVFVVYSNALATLILLPLTFFINSITVMQNCVFTAIDYSSPTLGSAMSNLTPAITFVLAVILGMEKLNVGSSISQIKVMGTVLSISGALLVTFYKGSAITSFRIAHSLSQPLPSLLAQTSNWAIGGLFFAAASISLALCNITQAAILKGYYSSQSTIVAFYCLFGTVQSAILAFIVVRDPNDWKISLDIELISIIYSAIVGSILTFSVMTWCIKRKGPVFVSLFKPVSIAIAAFSSVLFLGETLHVGSVLGAVIIAIGFYAVIWAQSKEANAKDLQIDGQSSPSSQASPLLQTVP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04600 318 PANTHER WAT1-RELATED PROTEIN 1 298 IPR030184 GO:0016020|GO:0022857
Spst3g04600 318 Pfam EamA-like transporter family 147 286 IPR000620 GO:0016020
Spst3g04600 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 193 291 - -
Spst3g04600 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04600 Spst-Chr3 97799847 97801997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04600 2 316 Nodulin-like Gene Family AT5G40240 39.244 8.44e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04600 - - psat:127073896 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01445 2 13245869 13249722 Spst3g04600 3 97799847 97801997 ECH
Spst9g01277 9 12223813 12229086 Spst3g04600 3 97799847 97801997 ECH
Spst3g04600 3 97799847 97801997 Spst3g04600 3 97799847 97801997 ECH