Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04581 ATGAAAGATCTCTGCTTCAAGCTTGTTTCCATTATTCCTTCCAAGTACCTCAAACCCACCAAGGGCATGCTTTCCCAGCAGGATCAGCTTGATCTTGCAGCCACGTATATACAGCATCTGAGAGAAAGAATAGAGAAACTGAAGGTTGAGAAGGAACAAGCCATGGACATGATGAGAATAACCCACACCAATAATGGGATTTTCAATATTGACTCTCAGTTGCCTCTACTTGAGATAAAGGACTTGGGTTCGGGTATTGAAGTGATGTTGATAAGTGGGGTGAATAAGAACTTCATGCTCCACGAAGTAATTAGTGTCCTTGAGGAAGAGGGTGCTGAAGTTGTCACTGCCAACTTCTCTACCGTTGCTGATAGGGTCTTTTACACAGTTCATGCTCAGGTTAAAATATCAAGAGTTGGTGTTGAGCCGACGAGGGTATATCAAAGGCTTCGGGAATTGATTGCACCACTAGAAAGCTGGCAGTACATATAG 492 0.4329 MKDLCFKLVSIIPSKYLKPTKGMLSQQDQLDLAATYIQHLRERIEKLKVEKEQAMDMMRITHTNNGIFNIDSQLPLLEIKDLGSGIEVMLISGVNKNFMLHEVISVLEEEGAEVVTANFSTVADRVFYTVHAQVKISRVGVEPTRVYQRLRELIAPLESWQYI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04581 163 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 153 - -
Spst3g04581 163 Coils Coil 37 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04581 Spst-Chr3 97567571 97568354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04581 1 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.098 5.61e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04581 - - vun:114179389 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04581 3 97567571 97568354 Spst9g02226 9 50304589 50305875 ECH
Spst3g04581 3 97567571 97568354 Spst3g04581 3 97567571 97568354 ECH
Spst3g04581 3 97567571 97568354 Spst9g02226 9 50304589 50305875 PCT