Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04558 ATGGAGGAAACGTTTGTTCCCTTACGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTCATCTCTTTTGGGGAGCAACTGGAGAGAAATACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATCCATTCAGTTTTAGGAGGGCAGCCACTCCTCATACTTGGTGTAGCCGAGCCAACGGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAGGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTACGTTGCTCTTCTTGCTGGCCATTGTTGGTGCTTGCTCCATAATCAACAGATTCACACGCCTTGCAGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTTATGCAGCAGGCTATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCTCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCTTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCATTAAGAAGCCGTAAGGCTAGATCCTGGCGATATGGAGCAGGTTGGATGCGGGGATTTGTTGCTGATTATGGAGTCCCACTAATGATTCTGTTGTGGACTGCCGTGTCTTATATACCAACCAATAAGGTTCCAAGGGGGATTCCTAGGCGACTTTTCAGTCCAAATCCATGGTCACCTGGTGCATACGTAAATTGGACAGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCGGCGACTATGATTGCTGTGCTTTATTACTTTGATCACAGTGTTGCATCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGGAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCGTCCAACGGTGTGATTCCTCAATCTCCAATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTATTGCGTAACAAAATTGTATCTGCCGCACGGAAAAGCATGCAGAAAAATATGAACCTGAGTCAGTTATACCAAAGTATGCAAGAAGCATATGGTGAAATGCAGACTCCATTAGCCCACCAAATACCACCTCCCTTGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGTTACATTGATTGCCCTGTTGATGAGATTGTTTTCGATGTTGATAAGGATGTTGACGACCTTTTACCTGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTACTGCAGGCATTAATGGTTACAGTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTTTTCACCGCTCCAAGTCGAAGATATAAAGTGCTGGAGAAACACCATGCGACCTTTATTGAGACCGTTCCTTTCAAAACGGTTGCCTTGTTTACATTATTCCAGACAGCTTATTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTTCCCAAGTTTTTTAAGGGAGCCCATCTTCAAGAGTTGGATGCTGCAGCATATGAGGAAGTACCTGCTATTAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCGGACAACAGCAGTCAATATTAGTAGTGGGGAAATTCTTGACGAAATTATTACAAGGAGTCATGGGGAGATCCTCAATCAAAAATCAAGGAATTCAACTCCAACATCATGTGAAGATACTATTCCTACTTATGGAACTATCTCAAAGGATTCAATGTCCTCGAGTAACTCAATTGAGAGGGTAAAGCCACCTAGGATCAATCATGATCGTGAAGGAGATCAAGTTCAAGAAAAGTACTAG 2109 0.4291 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSVLGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTATLLFLLAIVGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWMRGFVADYGVPLMILLWTAVSYIPTNKVPRGIPRRLFSPNPWSPGAYVNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKIVSAARKSMQKNMNLSQLYQSMQEAYGEMQTPLAHQIPPPLGLKEMKESTIQLAQSHGYIDCPVDEIVFDVDKDVDDLLPVEVKEQRLSNLLQALMVTVCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHATFIETVPFKTVALFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEVPAISFNLSFEDSGSRTTAVNISSGEILDEIITRSHGEILNQKSRNSTPTSCEDTIPTYGTISKDSMSSSNSIERVKPPRINHDREGDQVQEKY 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04558 702 Gene3D Helical hairpin bin 18 60 - -
Spst3g04558 702 MobiDBLite consensus disorder prediction 650 702 - -
Spst3g04558 702 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Spst3g04558 702 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Spst3g04558 702 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016020
Spst3g04558 702 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Spst3g04558 702 MobiDBLite consensus disorder prediction 650 684 - -
Spst3g04558 702 MobiDBLite consensus disorder prediction 685 702 - -
Spst3g04558 702 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04558 Spst-Chr3 97222216 97226550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04558 1 667 Antiporters AT3G62270 74.813 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04558 K24194 - gmx:100815420 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04558 3 97222216 97226550 Spst3g04558 3 97222216 97226550 ECH
Spst3g04558 3 97222216 97226550 Spst9g02197 9 49021223 49026606 PCT