Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04555 ATGTGGGGTTTTAATCTCTTCAAGAGGCCTAAACTCAGTGGCACCCAGCTTGCAGCGATATTGCCACTGGCTCTGGTCCATACGTTGGGGAACGTATTTACTAACATGAGTCTTGGAAAGGTTGCTGTGTCTTTTACTCACACAATAAAAGCTATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGAATCCTACTGCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGTGTAGCGCTAGCATCTGCTACCGAGGCCTCTTTCAACTGGGCTGGATTTTTGAGTGCAATGGCTTCCAATTTGACAAATCAGTCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAACAAGGAGGAATCTATGGACAACATAACGCTCTTCTCAATAATAACGGTTATGTCCTTCTTGATATCAGCTCCTGCAACTTTGTTAATGGAGGGTGTCAAATTTACCCCTACTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCTCTTCTTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTATCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCGAACTCCTGTATCACCAATTAACGCACTTGGGACTGCTATAGCTCTTGCCGGTGTTTTCCTGTATTCCAGGGTGACGCGACTTAAGCCAAAGACAATTTAA 762 0.4344 MWGFNLFKRPKLSGTQLAAILPLALVHTLGNVFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGENPTAWVVGSLVPIVGGVALASATEASFNWAGFLSAMASNLTNQSRNVLSKKLMVNKEESMDNITLFSIITVMSFLISAPATLLMEGVKFTPTYLQSAGLNVNEVYIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFRTPVSPINALGTAIALAGVFLYSRVTRLKPKTI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04555 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 88 - -
Spst3g04555 253 PANTHER SOLUTE CARRIER FAMILY 35 15 246 - -
Spst3g04555 253 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 1 251 IPR004696 GO:0016020|GO:0022857|GO:0055085
Spst3g04555 253 Pfam Triose-phosphate Transporter family 1 243 IPR004853 -
Spst3g04555 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 171 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04555 Spst-Chr3 97199317 97206887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04555 1 251 Antiporters AT5G33320 80.080 1.08e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04555 K15283 - gmx:100780925 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04555 3 97199317 97206887 Spst9g02195 9 48985444 48989025 ECH
Spst3g04555 3 97199317 97206887 Spst3g04555 3 97199317 97206887 ECH
Spst3g04555 3 97199317 97206887 Spst9g02195 9 48985444 48989025 PCT