Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04536 ATGGAAGTCCCCAAATCCCCTTCGAAATACAAACGGATTGCCAAACACAAATGGCTCATAAAATTCGGTTTAGTCATTTTGGTGATGCTGCTTTTGTTTCTGGGTTTTTATCTTGAGGCAGATACCGGCAAACTCTATGCGTCGCCGTATTACACTGTGGTTGTGGATTGTGGAAGCACTGGGACACGGGTGAATGTGTATGAGTGGGTTGTAGGGGTGAAGGGAATAAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCGTATCCTGATAATACTGCTTTGGAGCCTTTGATTGTGTGGGCAGAACAAGTGGTGCCGCGCGAAATGCGCGGCGATACTCCTGCTTTTGTGTTTGCTACTGCTGGATTGAGGGGGCTCCCCAGGGAGGATGCTGATAGGATCTTGGGAGATATTGAGGTTGTTGTGAAAGATCATAGCTTTATGATGAGCAAGAACTGGATAAAGGTTTTGAGTGGGAATGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAAAATGGGCACCTTTGAAGATAACATTCCAAAGTCTCCCACTTTGGGACTTGTTGATTTGGGTGGCTCGTCTTTGCAGATTGTGGTAGAGATAGATGGTTCAGGTGATGATAAGCACGTGATGAGATCAAGGCTCAGATCAATGGAGCATCGGATTATGGCATCCTCATTGCCGGCATTTGGCTTAAATGAAGCGTTTGATAGGACAGTTCTTATGCTCAGAAACAATCAAAGTGAGGAAAGGACTGCTAGTATCTCTGAGCTCAGACATCCTTGTCTAGTATCAACTTTAATACAAAACTATACATGCCATTCTTGCTCTGGATTGTCTTCCACTTATCAGAAAACTCATAGCCAACACCAGGAAAGTGAACTTTATTCATTTCGTCTTACTGGAGAACCTGATTGGGATCAATGCAAAGAACTAGCTATTGCTGCTGCCATGAACTTGAGTGATTCCAAAGTGTCACATCTGACAGTTAGCCAAAATTGTCATGCTAGTTCATTTTCTCGTATTGGCACTGATATACTTAATTTAACGGCTGTTGCACGCCCAATCAAGTTTCATGCTTTATCTGGCTTCTTTTTTGTCTACAACAAGCTAAATTTGAGCCCAAGAGCCAACATATCAATGATTTGGGAGTCAGGCAAGCAAATATGTTCAAATTTATGGTCTGGCTTGAGAAGTGTGTCTGACAATCCAAATTATGCTGGACAATTTTGTTTCCGGGTGGCTTACATGGCATCATTGATTGATTATGGTCTGTGTCTTGGTGATGTTGAAACGGTATTTGGTCCAGGTGACATTTCGTGGACTTTAGGAGCTGCATTGATTGAAGGCGAATTTTTGTGGTTAAACCGTACAAGCCACAATGCCCATGCTATTATTTCAACTTTAAAGAATGTCAAGATTGGGAACCTGCAAGACTAG 1446 0.4295 MEVPKSPSKYKRIAKHKWLIKFGLVILVMLLLFLGFYLEADTGKLYASPYYTVVVDCGSTGTRVNVYEWVVGVKGISKGNLPVLLHSYPDNTALEPLIVWAEQVVPREMRGDTPAFVFATAGLRGLPREDADRILGDIEVVVKDHSFMMSKNWIKVLSGNEEAYYGWVALNYKMGTFEDNIPKSPTLGLVDLGGSSLQIVVEIDGSGDDKHVMRSRLRSMEHRIMASSLPAFGLNEAFDRTVLMLRNNQSEERTASISELRHPCLVSTLIQNYTCHSCSGLSSTYQKTHSQHQESELYSFRLTGEPDWDQCKELAIAAAMNLSDSKVSHLTVSQNCHASSFSRIGTDILNLTAVARPIKFHALSGFFFVYNKLNLSPRANISMIWESGKQICSNLWSGLRSVSDNPNYAGQFCFRVAYMASLIDYGLCLGDVETVFGPGDISWTLGAALIEGEFLWLNRTSHNAHAIISTLKNVKIGNLQD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04536 481 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 452 IPR000407 GO:0016787
Spst3g04536 481 Pfam GDA1/CD39 (nucleoside phosphatase) family 50 450 IPR000407 GO:0016787
Spst3g04536 481 CDD NBD_sugar-kinase_HSP70_actin 53 235 - -
Spst3g04536 481 Gene3D Exopolyphosphatase. Domain 2 159 435 - -
Spst3g04536 481 Gene3D - 40 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04536 Spst-Chr3 97063176 97073295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04536 25 451 Nodulin-like Gene Family AT4G19180 33.895 1.48e-73 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04536 - - vun:114175521 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04536 3 97063176 97073295 Spst2g00294 2 2248958 2252019 PCT