Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04517 ATGGAAGATGTGAATCGCACCCCAAGAGAAGCAAAGGATTACTATTCTAGATCAATATGGTTGTCAGAAACTGCGCAGGCATTTGGGGATCTTAAGAGAAGTGACAGAAATGGAGTTAATGGCTTTCATTTTACTGCTGGTAGAGATTCCTTCGTCTATAACTCCCAAGAAATTATGACTCCCGAAATTTCTGGAGCATTTGAAGAAATCAAAAGTGTAATTAGTTCCAGAAATGGAGTTAATGATGAGGTTGTTGGCCAAGAAAACGGTGAATATGACCGCTATTCTATGCAAACGTTGTCCACAGAAATCGTGGAAATAGTTGAGGATGGCAAGAGCATAACAAAGGACAAAGATAGAAGGGTTGATGATCTTTATGTTGCTGTTGGCAAAGATGACTTGGATGTAGTGAAATGGGCTCTTGAGCATGCTGTTTCTCCCGGTTCCCGGATTTTTCTTATTCACGTCTCTTCTCCAATAACATCGATTCCTACGCCAGTTGGAAGGTTTGAAAGAAGTAAACTGACTCCACAACAAGTGAGACTATACGTGAATGAAGTGAACATCAAGAGGAAGGATCTTTTGCAGAAGTACATTCAGATGAGTAATGAAGCCAAGGTAACTGCTGAAACGTTGCTTCTGGAGAGCAATGATACAGGAAAAGCAATTCTGGATCTCGTCTCCATTCTTAACATAACCAACCTTGTCATTGGAATCAAAAAGCTACCCTATACACGGCGCAACCACAAATTGAGCAAAGGAGAGTTCGTAAAGAAACATGCACCGAATGCCTGTGAAGTTACCTTGGTTTATAACGGAGAGGTGTTTGTGTCTGATCCTTACATGGATGGCTTGGTATCCTATGGCCAAGCATCACACAGTAAAAGTCACTACAAAAACAACTTCTTTCAATGCATGTGCTTTTCAGGGTGCATGAAAGAAGACAATGATAGCTAG 957 0.4096 MEDVNRTPREAKDYYSRSIWLSETAQAFGDLKRSDRNGVNGFHFTAGRDSFVYNSQEIMTPEISGAFEEIKSVISSRNGVNDEVVGQENGEYDRYSMQTLSTEIVEIVEDGKSITKDKDRRVDDLYVAVGKDDLDVVKWALEHAVSPGSRIFLIHVSSPITSIPTPVGRFERSKLTPQQVRLYVNEVNIKRKDLLQKYIQMSNEAKVTAETLLLESNDTGKAILDLVSILNITNLVIGIKKLPYTRRNHKLSKGEFVKKHAPNACEVTLVYNGEVFVSDPYMDGLVSYGQASHSKSHYKNNFFQCMCFSGCMKEDNDS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04517 318 Gene3D HUPs 124 274 IPR014729 -
Spst3g04517 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 312 - -
Spst3g04517 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 133 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04517 Spst-Chr3 96855955 96857824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04517 123 278 U-box Gene Family AT3G61390 30.247 2.84e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04517 - - pvu:PHAVU_003G204300g 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04517 3 96855955 96857824 Spst3g04517 3 96855955 96857824 ECH