Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04515 ATGTTGATTATTCAACGTTGTGCACGAAGTGTTCAAACCAAATCCAACCAAAACATACCTGGCCTCGAGGGGGACGAATCCTCTACTCCCACCTCACCCATGTCTCCTTCCAAAATCACCGTCGCCGGTGAAATTTCATTTTCCGGCATGTGGTTCCGTCTTCTTCTACACCTCTCTCTCTTTGCGACTCCTTCACTTTCCCTGGATTTTCTATTCAACTCCTTCACCGGCATCACCAACCTCACTCTCGTCAAAGACGCTCGCGTCGACGCCTCTGTGATCCGCATGACAAACGACTCCAACCAGTACTCTTACGGCCGCGCCTTCTACCCCACAAAAGTCTCTATGAGAAAAACCTCTTCCAATTCCTCATCCTCATCCATTAATTCATTCTCCACCTCTTTTGTCTTCTCCATCTTGCCGCAAATCCCTACCAGTCCCGGCTTCGGCCTCACCTTCGTCCTCTGCAACACCACTGACCCTCCTGGCGCCCTCGCTAGCCAGTACTTCGGTCTATTCACCAACGCTACCTCCCCCTCATTCTTCCCCCTCGTCGCCGTCGAATTCGACACCGGCCAGAACCCCGAGTTCAACGACATCGATGATAACCACATCGGAATCGACCTCAACAACATCGAATCCACCATCGCAACCCCCGCCGGCTACTACAACTCCACCGGCGGGTTCGTGCCGGTCCGCATGCGCACCGGACAGAACATACGAGCCTGGATTGATTTTGACGGCCAGAATCTCCTGTTCAACGTAACGGTCGCTCCAATTGGCGTTTCGCGCCCGTTGAAACCTACGCTTTCGCATTATATTCCCACCATAGGTAACTACGTGTCCGCTGACATGTACGTCGGGTTTTCCGCTTCCAAAACGAACTGGATCGAGGCGCAGAGGGTTCTCGCGTGGAGCTTCAGCAACTCAGGGCCAGCGAGGGAGCTGAACACTACAAACTTACCAGTATTCGAACCGGAATCGTCGTCTTCCTCGCTTTCTGGTGGCGCAGTAGCGGGGATTGTTGTCGGTTGTGTTGTTTTCGTGGTTATATGTGCTTCTGGTTTTTACTTATGGTGGCGAATCCAGAAAGCGAAAGACAAAGAAGACGAGGAGATCGAAGATTGGGAGTTAGAGTACTGGCCGCATAGATTCTCGTACGAGGAATTGAGTTCAGCGACAGGGGAATTTGGGAAGGAGCAGTTGCTAGGTTCGGGAGGGTTCGGGAGAGTATACAGAGGGACGTTACCGAACAAGACGCAGATTGCGGTGAAGTGCGTGAACCACGATTCGAAGCAAGGGTGGCGGGAATTCATGGCGGAGATATCGAGTATGGGGAGGCTTCAACACAAGAACTTGGTTCAAATGCGAGGGTGGTGTAGAAAGGGGAACGAGCTTATGCTTGTTTATGATTACATGCCCAATGGGAGTCTCAACAAGTGGGTTTTCGATCAGCCGGAGAAGCTTCTAGAATGGGAGCAACGGCGTCGTATCCTTGTCGACGTCGCAGAGGGGCTTAACTACCTTCACCACGGTTGGGACCAGGTTGTTATTCACCGAGATATTAAGTCCAGTAACATATTATTGGACGCGGACATGCGAGGGAGACTCGGGGACTTTGGTTTGGCCAAGCTTTACACGCACGGGGAGGTTCCCAACACCACACGTGTTGTGGGGACGTTGGGCTACTTGGCACCGGAGCTCGCCACTGTCACGGCGCCGACGTCGGCGAGTGACGTGTACAGCTTTGGGGTGGTGCTGTTGGAGGTGGCATGCGGGAGGCGCCCAATTGAGACTTCGGTGGCGGAGGAGGAAGTGGTACTCATTGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGCGCACTCGAGGCTGCGGATGCGAGAATTGGAGGGGAGTACGATGAGGGAGAAATGGAGATGGTTTTGAAGCTTGGCTTGGCTTGTTGCCACCCTGACCCCCAGAGGAGACCCACCATGAAGGAAGTCGTCGCGCTTCTCCTCGGAGAGGATCCGCCGGAGGCACCTGGAAAAGTCTTGTCCGATTTGGTTCGCGGCGGCGACGATTTCGACGAGGCGGCTCCTTTACAGCCCTCGTCCACGCGGGTTTGA 2109 0.5396 MLIIQRCARSVQTKSNQNIPGLEGDESSTPTSPMSPSKITVAGEISFSGMWFRLLLHLSLFATPSLSLDFLFNSFTGITNLTLVKDARVDASVIRMTNDSNQYSYGRAFYPTKVSMRKTSSNSSSSSINSFSTSFVFSILPQIPTSPGFGLTFVLCNTTDPPGALASQYFGLFTNATSPSFFPLVAVEFDTGQNPEFNDIDDNHIGIDLNNIESTIATPAGYYNSTGGFVPVRMRTGQNIRAWIDFDGQNLLFNVTVAPIGVSRPLKPTLSHYIPTIGNYVSADMYVGFSASKTNWIEAQRVLAWSFSNSGPARELNTTNLPVFEPESSSSSLSGGAVAGIVVGCVVFVVICASGFYLWWRIQKAKDKEDEEIEDWELEYWPHRFSYEELSSATGEFGKEQLLGSGGFGRVYRGTLPNKTQIAVKCVNHDSKQGWREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWVFDQPEKLLEWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVTAPTSASDVYSFGVVLLEVACGRRPIETSVAEEEVVLIDWVRELYAKGCALEAADARIGGEYDEGEMEMVLKLGLACCHPDPQRRPTMKEVVALLLGEDPPEAPGKVLSDLVRGGDDFDEAAPLQPSSTRV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04515 702 CDD STKc_IRAK 403 666 - -
Spst3g04515 702 Gene3D Transferase(Phosphotransferase) domain 1 473 673 - -
Spst3g04515 702 Gene3D - 66 325 - -
Spst3g04515 702 FunFam L-type lectin-domain containing receptor kinase S.4 473 677 - -
Spst3g04515 702 MobiDBLite consensus disorder prediction 14 36 - -
Spst3g04515 702 FunFam L-type lectin-domain containing receptor kinase S.4 66 315 - -
Spst3g04515 702 SMART serkin_6 397 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04515 702 ProSitePatterns Legume lectins beta-chain signature. 185 191 IPR019825 -
Spst3g04515 702 Pfam Protein kinase domain 399 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04515 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 67 324 IPR013320 -
Spst3g04515 702 PANTHER - 92 670 - -
Spst3g04515 702 FunFam L-type lectin-domain containing receptor kinase S.1 382 472 - -
Spst3g04515 702 Pfam Legume lectin domain 68 321 IPR001220 GO:0030246
Spst3g04515 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Spst3g04515 702 Gene3D Phosphorylase Kinase; domain 1 360 472 - -
Spst3g04515 702 ProSiteProfiles Protein kinase domain profile. 397 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04515 702 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Spst3g04515 702 CDD lectin_legume_LecRK_Arcelin_ConA 68 311 IPR001220 GO:0030246
Spst3g04515 702 SUPERFAMILY Protein kinase-like (PK-like) 378 667 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04515 Spst-Chr3 96846981 96849089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04515 65 668 Receptor kinase-like Gene Family AT1G15530 67.323 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst3g04515 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04515 - - gmx:100780660 1133.63