Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04514 ATGGGATCTAAACTCCAACATAATAACAATAGTAGTACTATGAAGTTCCTCTGTAGTTACGGCGGCAAGATCCTGCCTCGCCGCACCGACGGTAACCTTCGATACTGTGGCGGCCACACCAGAGTCCTGGCTCTCCATCCTTCCGCTTCATTCTCAGATTTGATGGTAAAGATTAGCGAGTTGTATGGTTCGCCGGCGACACTCCGATGTGCATTGCCAAACGGAGACTTGGAAACCTTGATTTCCGTCAAAAACGACGAAGATTTGGCTATTATAATCGAGGAATACGATCGAGCCTCTTCGTCCTTACCTCACCGGCTCAAGATCAGAGCCATTCTTTCGCCGCTAAACAAATCCTCTCCTTCTCCGTCTTCTTCGTCCAGTGCTGCTCATACTCCGTCCGGTTCGCCTCACTCCCCCGCCGGTTTCTCGCCTTGTTATCAGGCGCATCGGTTCGGCTGCAGGAATTACTTGCCGGCTGTGTATTCTATTGGCGTCCATAACGGAGCGGCGAAATCTTGTTCGCCTCCCTCCTCGCCCGGTTCCCGGCCTTGCTGGTTCTGTTGCCGAAATATTTCCTCGGCTACGTATCTTATTGGCAACAGTAATGGAGCGATGAAATCCAGTTCCCCTCAGTCCTCCGGCGGTTCCTCGCCGTACTTCGCTGCCCACCGGTTTAGCTGCCATAATTGCTCGCTGGTTCCGTATCCTATTGGCGATTGTATTGCAGCTGCAAAAGGATATTAA 747 0.5167 MGSKLQHNNNSSTMKFLCSYGGKILPRRTDGNLRYCGGHTRVLALHPSASFSDLMVKISELYGSPATLRCALPNGDLETLISVKNDEDLAIIIEEYDRASSSLPHRLKIRAILSPLNKSSPSPSSSSSAAHTPSGSPHSPAGFSPCYQAHRFGCRNYLPAVYSIGVHNGAAKSCSPPSSPGSRPCWFCCRNISSATYLIGNSNGAMKSSSPQSSGGSSPYFAAHRFSCHNCSLVPYPIGDCIAAAKGY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04514 248 SUPERFAMILY CAD & PB1 domains 30 117 - -
Spst3g04514 248 CDD PB1_UP2 17 113 - -
Spst3g04514 248 Gene3D - 34 112 - -
Spst3g04514 248 MobiDBLite consensus disorder prediction 117 136 - -
Spst3g04514 248 PANTHER OS05G0427100 PROTEIN-RELATED 10 222 - -
Spst3g04514 248 Pfam PB1 domain 30 107 IPR000270 GO:0005515
Spst3g04514 248 SMART PB1_new 28 114 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04514 Spst-Chr3 96816826 96818690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04514 14 98 MAP Kinase Kinase Kinase AT3G46920 42.353 7.88e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04514 - - vun:114177582 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04514 3 96816826 96818690 Spst3g04514 3 96816826 96818690 ECH