Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04499 ATGTGTACTTGCATGAAAAGGGTTCAATCACTTCACCAAATCAGAGAAGAAGTTGCCAAATTGGTGAATGAACTTCGTGATGTGAGCTCCAGTGATGAGTGCAATGTAAATCTAAGCGAAATGCTTAACTCAACATCGAACAACATCGTGTGTAAATGTGCTCTTGGACGGAAATACACGAGAGATGGTTACAGCAGAGTGAAAGAATTAGCAAGGAACGTTATGGTTCAGCTTGTAGCTTTCACTGTGGGAGATTACTTTCATTTGCTGGGTTGGGTTGATTATCTGACTGGAAAAATTCAAGAATATAAGGCCACTTTTCATGCACTGGATGCTTTATTTGACCAAACAATTGCGGAGCATTTGACAGAGAAGATGGAATGTGACCACTTGAAAAATAAAGACTTTGTGGATATCCTACTCCAACATCAACAGAGTGACATGCTTAACCTTGAGCTCACCAAAAATGACCTCAAAGCACTTCTCCTGGATATGTTCGTTGGAGGAACTGACACAGGTGCAGTTGTATTAGAATGGGCTATTTCAGAGCTTGCGAGAAACCCAACCATAATGAAGAAAGTACAGGAAGAAGTGAGAAAAATCGACATTCCAGCAAAAACAAGGGTTTATGTTAATGCATGGGCAATTCAAAGGGATCCTACATTTTGGGAAAGTCCCGAAGAATTCATGCCAGAGAGATTTGAAAACAGTGAAATTGATTTTAAAGGTCAACATTCTCATTTTATTCCATTTGGTTTTGGGAGAAGAGGATATCCTGGAATGAATTTTGGAGTTACTTTTGTTGAATATATTCTGGCCACCCTTCTTTATCGGTTCGATTGGAAGTTGCCTGAGTCTGATAGACTTAAACAAGATATCGATATGACCGAGATGAAAATGGCTCTTCAATCAACTCCACAACCATCTTCGTCAAAGCCAACCGCATCATTCTCCTTCCTATGCTTCTTCATCAGCGTTGTGTTTGTCGTGTTTAAACTCTCCAGAAGAACCAAACGCAATTCACCTCCATCCCCACCAAAGATACCCGTCATAGGAAATCTTCATCAGCTTGGCACATTGCCACACCGTTCCTTCCAAGCTCTCTCTCGCAAGCATGGTCCTCTCATGTTGCTGCAGCTGGGGCAGGTCCCAACGCTCGTCGTTTCATCTGCTGACGTGGCCGGAGAAATACTCAAAGCCCACGACCTCGCTTTGTTGAACAGGCCAAAATCCGCCGCCGGCGGAGTCTTTCTCTACGGCTACAAGGACGTGGCTTTCGCCCCCTACGGCGAGGAGTGGAGACAGAAGAGGAAGGTATGCGCTCTTGAGCTTGTGAGCATGAAAAGCGTGCGGTCGCTGCACTTCATCCGCGTCGAAGAAGTTGCAGAAATGGTGGGTGCGATACGCGAAGCGTGTGCTAGTCAAACAGCCTCTGTGAACCTGAGTGAGTTGTTGATTGCACTCTCCAACAACATAATGTCGAGGTGTATTCTTGGACAAAAATATGATACTCCGGATGGTAGGAGCAGCTTTGGGGAGATTGGAAGGACGTTGCTGAGTCAGTTCACAGCTTTCTGCGTGGGAGATTTCTTCCCTTGTTTGGGTTGGGTTGATGTTCTAACGGGCCAAATTTCAAAGTTTAAGGCCACTTTTCGTTTGTTAGATGGTTTCTTTGATCAGGTAATTGCAGAACATAAAGAAAAGATGAAGAAGAGGGATGGTATCCTATCCGAAAAGAAAGACTTCGTGGATATTCTTTTTCAACTTCATGAGGCCGGTTTGCTTGGCTTTCAGCTCTCCCAAGATGTTCTCAAAGCATTTGTAATGACATTGAAGGAAAAAGAAATTGAGGCAGGGGCAAGTGACACATCTTCAACAGTTTTGGAATGGACTATGGCAGAGCTCATGAGGAATCCAAATACCATGGAAAAGGCACAGGAAGAAGTAAGAAGAGTGGTGGGGGATAAAGCAGAAGTAGATGAAGATGATTTGAAACAAATGAGTTACTTAAATTGTGTACTCAAAGAATCTTTGAGGTTACATCCCCCTGCTCCTCTTTTGATTCCTAGAGAAACAACCTCTGATGTGAAGCTGAGAGGGTACGATATTCCAGCCAAGACAAGGGTAATGTTCAACGCATGGGCAATACAGAGGGACCCTGAACTTTGGGACAAACCAGACGAGTTCCTTCCAGATAGATTTAAAAACAGCCACTTAGATTTCAAAGGACAAGATTTCGAGTTTATTCCATTTGGTTCTGGAAGAAGGGGATGCCCAGGAATTTCATTTGGGATGACTGTAGTTGGGTATGCCCTTGCCAATCTTCTTTATTGGTTCGATTGGAAGCTGCCTAAAACTGATGCAGCAGAGCAAGGTATTGACATGAACGAGACGTATGGGCTCACTGTCAGCAAGATGGTTCCACTTCTCCTTCAACCAACGCCCTTCTCCTTAGCAAGTGGATCTAAACCTTGA 2475 0.4384 MCTCMKRVQSLHQIREEVAKLVNELRDVSSSDECNVNLSEMLNSTSNNIVCKCALGRKYTRDGYSRVKELARNVMVQLVAFTVGDYFHLLGWVDYLTGKIQEYKATFHALDALFDQTIAEHLTEKMECDHLKNKDFVDILLQHQQSDMLNLELTKNDLKALLLDMFVGGTDTGAVVLEWAISELARNPTIMKKVQEEVRKIDIPAKTRVYVNAWAIQRDPTFWESPEEFMPERFENSEIDFKGQHSHFIPFGFGRRGYPGMNFGVTFVEYILATLLYRFDWKLPESDRLKQDIDMTEMKMALQSTPQPSSSKPTASFSFLCFFISVVFVVFKLSRRTKRNSPPSPPKIPVIGNLHQLGTLPHRSFQALSRKHGPLMLLQLGQVPTLVVSSADVAGEILKAHDLALLNRPKSAAGGVFLYGYKDVAFAPYGEEWRQKRKVCALELVSMKSVRSLHFIRVEEVAEMVGAIREACASQTASVNLSELLIALSNNIMSRCILGQKYDTPDGRSSFGEIGRTLLSQFTAFCVGDFFPCLGWVDVLTGQISKFKATFRLLDGFFDQVIAEHKEKMKKRDGILSEKKDFVDILFQLHEAGLLGFQLSQDVLKAFVMTLKEKEIEAGASDTSSTVLEWTMAELMRNPNTMEKAQEEVRRVVGDKAEVDEDDLKQMSYLNCVLKESLRLHPPAPLLIPRETTSDVKLRGYDIPAKTRVMFNAWAIQRDPELWDKPDEFLPDRFKNSHLDFKGQDFEFIPFGSGRRGCPGISFGMTVVGYALANLLYWFDWKLPKTDAAEQGIDMNETYGLTVSKMVPLLLQPTPFSLASGSKP 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04499 824 Gene3D Cytochrome P450 3 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 SUPERFAMILY Cytochrome P450 11 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS P450 superfamily signature 672 683 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS P450 superfamily signature 749 758 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS P450 superfamily signature 168 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 758 781 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 369 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 488 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 671 689 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 712 736 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 748 758 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 PRINTS E-class P450 group I signature 628 654 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 Gene3D Cytochrome P450 200 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 Coils Coil 642 662 - -
Spst3g04499 824 SUPERFAMILY Cytochrome P450 342 815 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 751 760 IPR017972 GO:0005506|GO:0016705
Spst3g04499 824 Coils Coil 11 31 - -
Spst3g04499 824 PANTHER CYTOCHROME P450 71B11-RELATED 327 814 - -
Spst3g04499 824 FunFam Cytochrome P450 83B1 329 812 - -
Spst3g04499 824 Pfam Cytochrome P450 14 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 Pfam Cytochrome P450 200 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 Pfam Cytochrome P450 342 787 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 Gene3D Cytochrome P450 327 809 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04499 824 CDD CYP71-like 371 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04499 Spst-Chr3 96659858 96664880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04499 322 816 Cytochrome P450 AT3G48280 44.064 1.62e-139 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04499 K20617 - gmx:100792382 605.905