Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04498 ATGAAAAAAATGTTCTTCTCTACCTTTTATCTCTCTATTTTCTTCTTTATCAGCGTCCTATTCTTGTTTAATCTAACAAGAAAAACCAAATCCAAAAGCAATCTGAATTTGCCTCCATCACCACCAAAACTACCACTCATAGGCAATCTTCATCAGTTAGGTGCACTGCCACATCGTTCTCTTCGAGATCTCTCACTCAAATATGGTGACATCATGATGCTGCAGTTGGGGCAGTTGCAGAATCCAACTGTGGTGGTTTCATCCGTAGAAGTGGTCATGGAAATCATGAAAACGCATGACATGTCCTTTTCCAACCGACCCCAAAACACTGCTGCAAAAATCTTACTCTACGGATGCATTGATATTGCATTTGGACACTACGGGGAAAGCTGGAGTCAGAAAAAGAAAGTATGCGCCCATGAACTTCTGAGCCAGAAAATGGTTGAATCATTTCATGAAATCAGAGAGGAAGAAGTGGGCAAATTGGTGAACAAGCTACGTGAAGTGAGTTCCAGTGAAGATTGCTGCGTGAATCTAAGAGAGATGCTTATGTCAACATCGAATAACATCGTGTGTAAATGTGCTTTCGGTAGGAAATACACTGGAGATGGTTACAGCAGGGTGAAAGAGTTGGCAAGAAATGTTATGGTTCAGCTTGCAGATTTTACCGTGAGGGATTACTTCCCTCTGTTGGGTTGGATTGATGTTCTCACTGGAAAAATGCAGAAATACAAGGCCACTTTTGAATCGTTGGATGCTTTATTTGATGAAGCAATTGCAGAGCATTTAACTCTGAAGATGGAGGATAACCACTCCAGAAAGAAAGACTTTGTGGATATCCTACTTCAACTTCAAGAGAACAACATGCTTAATTTTGAGCTCACCAAAAATGACCTCAAAGCACTTCTAATGGATATGTTCGTGGGAGGAACTGACCCAGCTGCAGTAACATTAGAATGGGTTATTTCAGAGCTTGTGAGAAACCCAAGCATAATGAAGAAAGTACAAGAAGAAGTGAGAAAAGTTGTGGGGCATAAATCAAATGTAGAAGAAGAGGATATCAATGAAATGCATTATCTGAAGTGCATAGTGAACGAAACTCTAAGGTTGCACCCACCTGCTACTCTTTTGGCTCCACGTCAAACAATATCCGGAGTTAAATTGCAAGAATATGATATTCCTGCAGAATCGATGGTATATATTAATGCATGGGCAATTCAAAGGGATCCTTCATTTTGGGAAAGTCCTGAAGAGTTCCTGCCAGAGAGATTTGAAAACAGTGAGGTTGATTTTAAAGGTCATCACTTTCAGTTTATTCCATTTGGGTTTGGGAGAAGAAGATGCCCTGGAATGCATTTTGGAGTTGCTTCTGTTGAGTATGTTCTTGCCAGCCTTCTTTATTGGTTCGACTGGAAGTTGTCTGAATCTGATGCACTGAAGCAAGACATAGATATGAGCGAGACGTTTGGACTGGTTGTCTCAAAGAAAACACTACTTTATCTCAAACCAATAGCTTATTCATTTTCATCCAAGTCTTCAAAAACTCTCTGA 1551 0.4023 MKKMFFSTFYLSIFFFISVLFLFNLTRKTKSKSNLNLPPSPPKLPLIGNLHQLGALPHRSLRDLSLKYGDIMMLQLGQLQNPTVVVSSVEVVMEIMKTHDMSFSNRPQNTAAKILLYGCIDIAFGHYGESWSQKKKVCAHELLSQKMVESFHEIREEEVGKLVNKLREVSSSEDCCVNLREMLMSTSNNIVCKCAFGRKYTGDGYSRVKELARNVMVQLADFTVRDYFPLLGWIDVLTGKMQKYKATFESLDALFDEAIAEHLTLKMEDNHSRKKDFVDILLQLQENNMLNFELTKNDLKALLMDMFVGGTDPAAVTLEWVISELVRNPSIMKKVQEEVRKVVGHKSNVEEEDINEMHYLKCIVNETLRLHPPATLLAPRQTISGVKLQEYDIPAESMVYINAWAIQRDPSFWESPEEFLPERFENSEVDFKGHHFQFIPFGFGRRRCPGMHFGVASVEYVLASLLYWFDWKLSESDALKQDIDMSETFGLVVSKKTLLYLKPIAYSFSSKSSKTL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04498 516 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 Coils Coil 332 352 - -
Spst3g04498 516 PANTHER CYTOCHROME P450 71B11-RELATED 20 503 - -
Spst3g04498 516 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Spst3g04498 516 Gene3D Cytochrome P450 23 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 FunFam Cytochrome P450 83B1 25 502 - -
Spst3g04498 516 Pfam Cytochrome P450 38 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04498 516 CDD CYP71-like 67 499 - -
Spst3g04498 516 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04498 Spst-Chr3 96646036 96647898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04498 20 506 Cytochrome P450 AT3G26320 43.496 6.90e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04498 K20617 - gmx:100803384 784.252