Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04495 ATGGCCTTATACGAACAAATGAAAGGAGTCTTCACTTCTACCTTCTATCTCTCTCTTTCCTTTTTCATCACTGTAATTCTCGTCTTGTTTAAGCTTGCAAGAAGCTCCAAACCCAAATCCAATCTGAACCTTCCTCCATCTCCCCCAAAGCTACCATTTATCGGGAATCTGCATCAGTTTGGCACACTGCCACATCGATCTCTTCGAGATCTCTCTCTCAAATATGGTGATATGATGATGTTGCAGCTGGGGCAGATGCAAACTCCAGCCCTTGTGGTTTCATCTGTAGATGTGCTCTCGGAAATAATCAAAACTCATGACCTAACCTTTTCGGACCGACCCCAAAACACTGCTGCAAAAATCTTACTCTATGGATGCGCAGATGTTGGCTTCGCACTCCACGGAGAAAACTGGAGACATAAAAGAAAAATATGTGTGCTTGAACTCCTGAGCACCAAAAGGGTGCAAGCATTTGGAGTCATCCGGGAAGAAGAAGTTGCGGAGTTGGTGAACAAGCTACGTGAAGCAAGCTCGAATGGTGCAAGTTACGTGAATCTAAGTGAGATGATTATGTCAACATCAAATAATATTGTGTGTAAATGTGCTCTTGGAAGGAAGTTTGAAGGAGATGATGACAACAGAGTGAAAGTGTTAGCGAGGGAAACTATGATTCATCTCGCAGCATTCACAGTGAGAGATTATTTCCCTTGGCTGGGTTGGGTTGATGTTGTCACTGGAAAAATTGAGAAATACAAGGCCACTGCTGGAACAATGGATGCTTTATTTGATGAGGCAATTACAGAACGTTTGAGGGCGAAAAGGGAAGGTGAACACTCCAAAAGGAAAGACTTCGTGGATATCCTCCTCCAACTTCAGGAGGATAACATGCTGGGCTTTGAGTTCACCATGAATGACGTCAAAGTACTTGTAACGTTGAAAGTTGTTAAAAGTTTGATGAAAATTTCATTTGTTAGTTTAGGACATGTTTGTGGGAGGTACAGATACAACTTGGGCAGCATTAGAATGGGCTATGTCAGAGCTTCTGAGAAAACCAACCGCAATGAAAAAGGTGCAAGAAGAAGTGGGAGAATTGTAGGTGAGAAATCAAACGTGGAAGAGAACGATGTGAATCAAATGCGCTATCTAAAATGTGTAGTAAAAGAAAGTATAAGGTTACACCCTCCAACTCCTCTTCTGGCTCCTCGAGTAACAAAGTCCGATGTAAAACTAAATGGCTACGATATTCCAGCAAAAACAACTGTATATATCAATGCATGGGCAATGCAAAGGGATCCTAAATTTTGGGAAAATCCTGAAGAGTTTCTGCCAGAGAGATTTGAAAATAGTGAAGTTGATTTTAAGAGTCAAGAAGACTTCCAGTTTATTCCATTTGGTTTTGGAAGAGGAGGATGTCCTGGAATGAATTTCGCAATCGCTTCCATTCACTATGTCCTTGCTAATCTTCTTTATTGGTTCGATTGGAAGTTGCCTACTGATGCACCAGATATAGATATGAACGATATGTTTGGACTTGTTGTCTCAAAGAAACTACCACTTCTCCAACTAATCAAGCTCTCTTCTGTTCTGAGTGGAGTATATTCAATGGCAAGTGACTCAAATTCAGAAAGTATTTGCAATAAGTGGTGGTCGTGCAACTTGTTTTTCAGCCTCACACCACTTTATGGATTTGTGGCTACAACCATCCCATCCAAATCCCAACCCACTCTGCCGCCGCCCACAATCACAACATGA 1752 0.4172 MALYEQMKGVFTSTFYLSLSFFITVILVLFKLARSSKPKSNLNLPPSPPKLPFIGNLHQFGTLPHRSLRDLSLKYGDMMMLQLGQMQTPALVVSSVDVLSEIIKTHDLTFSDRPQNTAAKILLYGCADVGFALHGENWRHKRKICVLELLSTKRVQAFGVIREEEVAELVNKLREASSNGASYVNLSEMIMSTSNNIVCKCALGRKFEGDDDNRVKVLARETMIHLAAFTVRDYFPWLGWVDVVTGKIEKYKATAGTMDALFDEAITERLRAKREGEHSKRKDFVDILLQLQEDNMLGFEFTMNDVKVLVTLKVVKSLMKISFVSLGHVCGRYRYNLGSIRMGYVRASEKTNRNEKGARRSGRIVGEKSNVEENDVNQMRYLKCVVKESIRLHPPTPLLAPRVTKSDVKLNGYDIPAKTTVYINAWAMQRDPKFWENPEEFLPERFENSEVDFKSQEDFQFIPFGFGRGGCPGMNFAIASIHYVLANLLYWFDWKLPTDAPDIDMNDMFGLVVSKKLPLLQLIKLSSVLSGVYSMASDSNSESICNKWWSCNLFFSLTPLYGFVATTIPSKSQPTLPPPTITT 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04495 583 Gene3D Cytochrome P450 37 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 Gene3D Cytochrome P450 361 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 Pfam Cytochrome P450 45 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 Pfam Cytochrome P450 363 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 SUPERFAMILY Cytochrome P450 48 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 PANTHER CYTOCHROME P450 71B11-RELATED 28 310 - -
Spst3g04495 583 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04495 583 FunFam Cytochrome P450 99A2 34 524 - -
Spst3g04495 583 CDD CYP71-like 74 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04495 Spst-Chr3 96612603 96617502 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04495 28 516 Cytochrome P450 AT3G26320 37.903 6.97e-110 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04495 K20617 - gmx:100781909 702.205