Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04494 ATGCTCCATTGTGTGGACACGTGGATGGTAAGATTTCATCTGAACCGCCTTCACGGTCGTTATTATTTGGCTAACATCGAGATTAGGGTTTCAGAAGCTGAGGCTCTATCATCACAAAAGCATATTTTCTCTTTCATCTTAATCTTTGTTGTTGAAGTTTTCGTAGTTTTTCGAATCATGGAGATGGAACGCGTCTTCGAATTTCCTCACTCTCACATGGATCGGCGCCCGAGAAAGAGGGCCAGATTGGGCTGGGACATTCCTGAGGTCCCTAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGGGCTATTTCAAGCTATGCTCCTTCAAGGGGTCCCTCAGAACATACCACTTGTTCCCTATTTGTTAAGGCAGTTGCTCAAAATGGTTCTCCCCCTTGGCGAGAGGATGACAAAGATGGACATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATCCATAGCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATGCTGGGATAGAGAAAGAAAGGAAATGGTTGCAATAAAAATTGTCCGTGGGATAAAAAAGTATCGAGAAGCAGCCATGATAGAAATTGAGGTGTTGCAACAGCTTGTCATGCATGATTTGCGTATGATTCATACTGACCTGAAGCCTGAAAACATTCTACTAGTTTCACCAGAGTATGTCAAAGTTCCCGACTACAAGAGTTCATCTAGATCACCAAGTACATATTTCAAGAGAGTTCCAAAATCTAGCGCCATAAAGGTTATTGATTTTGGCAGCACCACTTATGAGCGAGAAGATCAGACTTACATTGTTTCAACTCGTCATTATAGAGCTCCTGAAGTTATCCTTGGACTTGGCTGGAGCTATCCATGTGATATATGGAGTGTGGGATGTATATTGGTTGAGTTATGCACGGGCGAAGCTTTATTTCAGACTCATGAAAATTTAGAACATCTTGCTATGATGGAAAGGGTACTTGGTCCATTACCACAACACATGTTGAAGAGAGTCGATCGAAATGCCGAAAAGTATGTTAGAAGGGGTAGATTAGACTGGCCTGAGGGTGCAACCTCGAGGGAGAGTATCAAAGCTGTATTGAAGCTTCCTAGGCTACAGAACCTTATAATGCAGCATGTAGATCATTCAGCAGGCGATCTCATAAATCTCTTGCAGGGATTACTAAGATTTGATCCCTGTGAAAGACTAACAGCCAAGGAAGCTCTAAGATATCCCTTCTTTATGAGAGATCACTTTAGGAGATGA 1281 0.4239 MLHCVDTWMVRFHLNRLHGRYYLANIEIRVSEAEALSSQKHIFSFILIFVVEVFVVFRIMEMERVFEFPHSHMDRRPRKRARLGWDIPEVPKAQVGLFCGQDVGAISSYAPSRGPSEHTTCSLFVKAVAQNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLVMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSTYFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRNAEKYVRRGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDLINLLQGLLRFDPCERLTAKEALRYPFFMRDHFRR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04494 426 Gene3D Transferase(Phosphotransferase) domain 1 211 419 - -
Spst3g04494 426 SUPERFAMILY Protein kinase-like (PK-like) 144 423 IPR011009 -
Spst3g04494 426 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04494 426 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 210 422 - -
Spst3g04494 426 CDD PKc_CLK 144 419 - -
Spst3g04494 426 ProSiteProfiles Protein kinase domain profile. 12 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04494 426 Gene3D Phosphorylase Kinase; domain 1 128 210 - -
Spst3g04494 426 Pfam Protein kinase domain 203 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04494 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Spst3g04494 426 FunFam Serine/threonine-protein kinase AFC2 191 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04494 Spst-Chr3 96531504 96535331 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04494 210 423 MAP Kinase Gene Family AT4G11330 30.876 2.69e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Spst3g04494 Pkinase 7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04494 K08287 - gmx:100804452 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04494 3 96531504 96535331 Spst3g04494 3 96531504 96535331 ECH