Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04493 ATGCATGATTTGCGAATGATTCACACTGACCTGAAGCCTGAAAACATTCTACTAGTGTCACCAGAGTATGTCAAAGTTCCCGACTACAAGGTACTTTCCTTTCACAGACGCATGATTCCTTATTGTTTGGGACATGCTGCACCTTTTATTCCCAGAATGGTTTGCACCTCTCGTATCTATGAGAGCTCATCTAGATCTCCGGGTTCCTATTTCAAGAGGGTTCCCAAATCAAGTTCTATAAAGGTTATTGATTTTGGAAGCACCACTTATGAGCGAGAAGATCAGAATTACATTGTATCAACTCGTCATTATAGAGCTCCTGAAGTTATCCTTGGACTTGGCTGGAGGTATCCATGTGATATTTGGAGTGCGGGATGTATATTGGTTGAGTTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAAAATTTAGAACACCTTGCGATGATGGAAAGGGTACTTGGTCCATTACCAGCGCACATGTTGAAGAGAGTCGACCGACATGCTGAGAAATATGTTAGAAGGGGTAGATTACACTGGCCTGAGAGTGCGACCTCAAGGGAGAGTTTCAAAGCCGTAATGAAGCTTCCTAGGCTACAGAACCTTATAATGCAGCACGTAGATCATTCAGCTGGCGATCTCATACATCTCTTGCAGGGGTTGCTTAGATTTGACCCTTCAGAAAGACTTACAGCCAAGGAAGCTCTTAGACATTCCTTCTTTATGAGAGATCACTTCAGGAGACAAGTCTCTTTTTAA 759 0.4308 MHDLRMIHTDLKPENILLVSPEYVKVPDYKVLSFHRRMIPYCLGHAAPFIPRMVCTSRIYESSSRSPGSYFKRVPKSSSIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWRYPCDIWSAGCILVELCTGEALFQTHENLEHLAMMERVLGPLPAHMLKRVDRHAEKYVRRGRLHWPESATSRESFKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRHSFFMRDHFRRQVSF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04493 252 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 244 - -
Spst3g04493 252 Gene3D Transferase(Phosphotransferase) domain 1 1 241 - -
Spst3g04493 252 SUPERFAMILY Protein kinase-like (PK-like) 1 246 IPR011009 -
Spst3g04493 252 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04493 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 6 18 IPR008271 GO:0004672|GO:0006468
Spst3g04493 252 SMART serkin_6 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04493 252 Pfam Protein kinase domain 77 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04493 Spst-Chr3 96523659 96525587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04493 81 241 EF-hand Containing Proteins AT5G22840 31.461 1.33e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Spst3g04493 Pkinase 5.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04493 K08287 - gmx:100804452 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04493 3 96523659 96525587 Spst3g04493 3 96523659 96525587 ECH