Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04492 ATGGAGATGGAACGTGTCTTCGAATTTCCTCACACTCACATGGATCAACGCCCAAGAAAGAGAGCGCGGTTGGGCTGGGACATCCCTGAGGCTCCTAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGGACTATTTCCAGCTATGCTCCTTCAAGTGGTCCCTCAGAACATACCACTAGTTCTCTATTTGTTAAGGCAGTTGCTCAAAATGGTTCTCCCTCTTGGCGAGACGATGACAAAGATGGACATTACATGTTTGCGCTTGGAGATAATTTAACTTCTCGCTATAAGATCCATAACAAATTGGGTGAAGGAACTTTTGGGAAGGTAGTAGAATGTTGGGACAGAGAAAGGAGGGAAATTGTTGCAATAAAAATTGTCCGTGGAATAAAGAAGTATCGAGAAGCAGCCATGATAGAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCGGTAA 477 0.4382 MEMERVFEFPHTHMDQRPRKRARLGWDIPEAPKAQVGLFCGQDVGTISSYAPSSGPSEHTTSSLFVKAVAQNGSPSWRDDDKDGHYMFALGDNLTSRYKIHNKLGEGTFGKVVECWDRERREIVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04492 158 ProSiteProfiles Protein kinase domain profile. 98 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04492 158 Pfam Protein kinase domain 98 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04492 158 Gene3D Phosphorylase Kinase; domain 1 71 157 - -
Spst3g04492 158 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Spst3g04492 158 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 157 - -
Spst3g04492 158 SUPERFAMILY Protein kinase-like (PK-like) 85 151 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04492 Spst-Chr3 96521652 96523117 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04492 84 153 EF-hand Containing Proteins AT5G22840 38.028 3.47e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Spst3g04492 Pkinase 3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04492 K08287 - gmx:100804452 305.449