Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04490 ATGATCTCTTTGGTATTGTTTGTGTTCCTCACGTTCTTGTTCACCTTCTCATGGGTGAAACAGTTGGGAAAGCCTTCTGCAGAAAAGAGACTGCTACCTCCAGGGCCAAGGAAACTACCCTTCATCGGCAACCTGCACCAGCTGGGAGCATTGCCCCATCGATCCCTTCAACACCTTTCACGTAAGCATGGACCTCTCATGTTCTTGCAGCTGGGTTCCATACCCACCGTGATAGTCTCTTCTGCTGACATGGCTAAAGAGATCTTCAAAAACTATGATTCAGTTTTCTCTGGAAAGCCTCTACTACGCGCTGCGAACCGCTTAGGATACGGTTCAAGCGTGAGCTTTGCACCGTACGGTGAGTACTGGAGGGAAATGAGGAAAATCATGATGTTAGAGTTACTGAGTCCTAAAAGGGTTCAATCGTTTGAAGTTGTGAGGTTTGAAGAGGTAAAACTTCTGCTTCAGTCTATTGCTCTCTCTCCTGGTCCTGTCAACCTGAGTGAACTGACACTTTCGTTGACTAACAACGTTGTTTGTCGCATTGCTTTCGGGAAAAGGAACAGGGGTGGTGCAGATGATGCAAATAAGCTTGAGAAAGTGATTAAGGAGCATGTTGATCACTCTTCAGAGAGGACAGGAGCAGAGCATGAAGATATTGTGGATGTGCTTCTTCGAGTTCAGAAGGATCCGAATCAAGCCATTGCCATTACTGACCACCAAATCAAGGGTGTACTAGTGGACATCTTTGTAGCAGGAACTGATACTGCTTCAGCCACAATGATATGGACAATGTCTGAGTTGCTTAGGAACCCGAAAACAATGAAAAGAGCACAAGAAGAAGTAAGAGAAATTATGAAGGGAAAAGAAATGGTAGAAGAGATTGACCTCTCAAAGCTCTTGTACCTCAAGTCAGTTGTGAAAGAGGCACTGAGACTCCATCCTCCTGCGCCATTGCTTGTGCCAAGAGAGACCACAGAGGCTTGCATGATCAAAGGGTTTGAAATCCCTGCCAAAACGCGGGTGCTTGTTAATGCAAAATCAATAGCAATGGATCCAACTTCTTGGGAGAATCCAAATGAGTTCTTACCAGAGAGGTTCTTGGATAGCCCAATAGATTTTAAAGGACAACACTTCGAAATGTTGCCATTCGGGGTAGGGCGAAGGGGTTGCCCTGGAGTGAACTTCGCCATGCCACTTGTTGAGTTAACACTTGCAAACCTTCTGTTTCGTTTTGATTGGGAGCTGCCTCGTGGACTTGGAATAGAAGACTTGAATATGGAAGAAGCAATTGGAATAACCATACACAAGAAAGCTCATCTTTGGCTGAAAGCCACTCCCTTTCACGAGTAG 1353 0.4545 MISLVLFVFLTFLFTFSWVKQLGKPSAEKRLLPPGPRKLPFIGNLHQLGALPHRSLQHLSRKHGPLMFLQLGSIPTVIVSSADMAKEIFKNYDSVFSGKPLLRAANRLGYGSSVSFAPYGEYWREMRKIMMLELLSPKRVQSFEVVRFEEVKLLLQSIALSPGPVNLSELTLSLTNNVVCRIAFGKRNRGGADDANKLEKVIKEHVDHSSERTGAEHEDIVDVLLRVQKDPNQAIAITDHQIKGVLVDIFVAGTDTASATMIWTMSELLRNPKTMKRAQEEVREIMKGKEMVEEIDLSKLLYLKSVVKEALRLHPPAPLLVPRETTEACMIKGFEIPAKTRVLVNAKSIAMDPTSWENPNEFLPERFLDSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPLVELTLANLLFRFDWELPRGLGIEDLNMEEAIGITIHKKAHLWLKATPFHE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04490 450 SUPERFAMILY Cytochrome P450 33 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 CDD CYP71-like 62 441 - -
Spst3g04490 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Spst3g04490 450 PANTHER CYTOCHROME P450 71B11-RELATED 198 445 - -
Spst3g04490 450 Gene3D Cytochrome P450 24 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 Pfam Cytochrome P450 33 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 Pfam Cytochrome P450 196 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 345 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 304 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04490 450 FunFam Predicted protein 250 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04490 Spst-Chr3 96482582 96485551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04490 1 448 Cytochrome P450 AT3G48280 42.020 1.70e-127 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04490 K20617 - gmx:100806157 733.791