Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04481 ATGACTCCCAATACCATATCTATTGATTACCAAACCAATCGGGTCTTTCCCGAACCCGATGTCTTCATACACTGCTCCCAAGGAACACGCATTCCGGTCCACGCTAGCATTCTGGCTTCGGTGTCGCCGGTTTTGGAGAACTTCATAGATCGGCCGCGTAAGCATCGGAGCTCCGAGAGGATAATCCAAATCCACGGCGTACCTTGCGACGCGGTTATAGCCTTCGTTGGTTTTCTCTACTCCTCTAGGTGTACGGAGGAGGCGATGGACAAGTATGGAATGCACCTTCTCGCATTGTCTCACGTTTACCTGGTGCCGCTGTTAAAACAAAGGTGCATCAAGGGTTTGACCGACCGTTTGACCACGGAAAACGTCGTCGACGTAGTGCAACTCGCGCGCCTCTGCGACGCACCGGATCTCCACCTCCGCTGCATGAGGCTCCTCGCCAATAACTTCAAAGCGGTGGAGGCGACCGAGGGGTGGAAGTTCCTCGTCAAGCACGATCCCTGGCTCGAACTCGACATTCTCCGCTTTATCGACGAACACGAGACGAGGAAGAAGAAATCAAGGAGGCATAGGATGGAACAGGGGCTATACACGGAGCTGAGCGAGGCGATGGAATGTTTAGAACACATATGCGCCGAGGGGTGCACGCTAGTTGGACCCTACGATGTGGAGGTGCAGAGAGAGAGAAGGCCCTGTGGCAGATTCTCCACATGTCAAGGGCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAGAGGATGGCCGGTGGCTGCGTTCGCTGCAGGCGGATGTGGCAACTCTTTCGGCTTCATTCGTACGTTTGCCATCAAACTGATTCCTCCTGCAAGGTTCCTTTCTGCAGGCAATTTCAATTGAAGATGCAGCAAGAAAAAAGGAAAGATGATGCTAAGTGGAAACTTCTAGCGAGGAAGGTGGCCTCAGCCAAAGTCATGTCTTCCCTGTCTCTTCCAAAGAGGAAACGAGATGAGGAAATGAGAGTCACAATGAACAATCACGGGATTAGAAGCTTTAAATTACTATGA 1053 0.5204 MTPNTISIDYQTNRVFPEPDVFIHCSQGTRIPVHASILASVSPVLENFIDRPRKHRSSERIIQIHGVPCDAVIAFVGFLYSSRCTEEAMDKYGMHLLALSHVYLVPLLKQRCIKGLTDRLTTENVVDVVQLARLCDAPDLHLRCMRLLANNFKAVEATEGWKFLVKHDPWLELDILRFIDEHETRKKKSRRHRMEQGLYTELSEAMECLEHICAEGCTLVGPYDVEVQRERRPCGRFSTCQGLQVLIRHFATCEKRMAGGCVRCRRMWQLFRLHSYVCHQTDSSCKVPFCRQFQLKMQQEKRKDDAKWKLLARKVASAKVMSSLSLPKRKRDEEMRVTMNNHGIRSFKLL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04481 350 FunFam BTB/POZ and TAZ domain-containing protein 2 192 319 - -
Spst3g04481 350 Pfam BTB/POZ domain 19 117 IPR000210 GO:0005515
Spst3g04481 350 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Spst3g04481 350 SMART TAZ_2 196 291 IPR000197 -
Spst3g04481 350 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Spst3g04481 350 Gene3D TAZ domain 197 301 IPR035898 -
Spst3g04481 350 SUPERFAMILY TAZ domain 195 299 IPR035898 -
Spst3g04481 350 Gene3D Potassium Channel Kv1.1; Chain A 12 120 IPR011333 -
Spst3g04481 350 SUPERFAMILY POZ domain 20 150 IPR011333 -
Spst3g04481 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Spst3g04481 350 CDD BACK 121 168 - -
Spst3g04481 350 Gene3D - 121 196 - -
Spst3g04481 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 334 IPR044513 -
Spst3g04481 350 SMART BTB_4 19 120 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04481 Spst-Chr3 96403965 96406949 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Spst3g04481 BTB 7.2e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04481 - - gmx:100807120 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04481 3 96403965 96406949 Spst3g04481 3 96403965 96406949 ECH
Spst3g04481 3 96403965 96406949 Spst9g02064 9 41632787 41637415 PCT