Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04467 ATGGCCCCTCCTATTTATAGTGCCTTCAACGGAGAAATCGATGGTGAAAATCTACCTTTTGTGTTTGATATATGGGCAACCGATCTCAATTCCTATTATCCTCATCAACCTATTTCGGAGAGTAACAGTTCTACCTTAGTTCTTCCCTTTTGCGACGGAACCATAAGGGATAACAAAAGGGTGAAGAGAACCGTTGGAATCCCCGTCAGTTGGTTAGGAAGTTTTAGCAGCAATTCCCATAGTTTACTCAACACTAATTCCAACAACAGCAATAGGAATAGGGATAGCATACCGAAGCTCCATTTCAGAGATCACATACGGACTTACACTCAAAGATATCTCGCAGCGGAACCAGAAGAAGAGGTATCAGAAGATACAAATAGTTCAGAAAGTGGTGGAGCTGAAGAAGATGGTTGTCATGATGGAGTGAGGCTCGTTCAACTTCTAATAGCATGTGCGGAAGCAGTGGCTTGTCGAGACAAATCACACGCTTCCATATTACTATCCGAACTCAAAGCCAACGCGTTAGTATTCGGATCTTCGTTCCAAAGAGTTGCTTCGTGTTTTGTTCAAGGTCTAACCGAGAGGCTCAATCTGATTCAGCCCATCGGGCCCGTTTCCCCGATGCCACCCATAATGAACATCATGGACGCAGCCTCGGAAGAAATGGAGGAAGCATTCAGGTTGGTTTACGAGCTGTGTCCGCACGTCCAATTCGGGCACTTTGTGGCTAATTCCATAGTATTGGAAGCCTTTGAGGGTGAGAGTTTTCTCCATGTCGTGGACCTTGGAATGAGTCTCGGTCTAAGACATGGACACCAATGGAGAGCACTGATGCAGAGCCTTCGTACAGACGACCAACATGTTCGTCGTCTGCGAATCACGGGGGTAGGGCTCTGCGACAGACTCCAATCCATTGGCGACGAACTCTCAATATATGCAACTAATTTAGGCATCAACTTCGAGTTTTCAGTGGTGAAAAAGAATTTGGAAAGTTTGAAACCGGAGGACATAGAAGTGAGGGAAGAAGAGGTTCTTGTGGTGAACAGCATTCTGCAGCTGCATTGCGTGGTAAAGGAAAGCCGTGGGGCTTTGAATTCGGTGCTGCAGATGGTTCACGGGCTTGGGCCGAAAGTGTTGGTGATGGTGGAGCAAGATTCGGGTCATAACGGACCCTTTTTCCTTGGGAGGTTTATGGAATCATTGCATTATTATTCTGCTATATTTGACTCATTGGATGTTATGCTGCCCAAGTATGACACTAAGAGGGCAAAGATGGAGCAGTTTTACTTCGCCGAGGAGATAAAGAACATAGTGAGCTGTGAGGGGCCGTTGAGGATGGAGAGGCACGAGAGAGTAGACCAGTGGCGGAGGAGGATGAGCAGGGCGGGGTTTCAGGCTGCGCCGATTAAAATGGTGGCTCAGGCGAAGCAGTGGCTTCTGAAGAGCAAGGTTTGTGAGGGGTACACGGTGGTGGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCGAAGCCTATTGTGGCGGTTTCTTGCTGGAAATGCTGA 1548 0.4735 MAPPIYSAFNGEIDGENLPFVFDIWATDLNSYYPHQPISESNSSTLVLPFCDGTIRDNKRVKRTVGIPVSWLGSFSSNSHSLLNTNSNNSNRNRDSIPKLHFRDHIRTYTQRYLAAEPEEEVSEDTNSSESGGAEEDGCHDGVRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLNLIQPIGPVSPMPPIMNIMDAASEEMEEAFRLVYELCPHVQFGHFVANSIVLEAFEGESFLHVVDLGMSLGLRHGHQWRALMQSLRTDDQHVRRLRITGVGLCDRLQSIGDELSIYATNLGINFEFSVVKKNLESLKPEDIEVREEEVLVVNSILQLHCVVKESRGALNSVLQMVHGLGPKVLVMVEQDSGHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLLKSKVCEGYTVVEEKGCLVLGWKSKPIVAVSCWKC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04467 515 MobiDBLite consensus disorder prediction 114 136 - -
Spst3g04467 515 ProSiteProfiles GRAS family profile. 136 514 IPR005202 -
Spst3g04467 515 Pfam GRAS domain family 145 514 IPR005202 -
Spst3g04467 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 509 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04467 Spst-Chr3 96273467 96275014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04467 137 515 GRAS Transcription Factor Family AT1G66350 37.662 1.19e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst3g04467 GRAS 1.3e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04467 - - gmx:100813548 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04467 3 96273467 96275014 Spst3g04467 3 96273467 96275014 ECH