Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04432 ATGGCCACCACCACCACCACCAGTCTTGGCAGCGGCGCCGGTGGAGACGACCGCGTCCTCGCCACGGCTCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGTGAAGACATGCTTCTGATCTTCTCTAACTTCGATAACCGACTCTCTGGCATCTCCGACCTGATAAACGGCGACGATTCCAAATCCTCCGATGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCTGGCGCGTCTCTCTCTGGCGAGCCTTCGCGCCAATCCACGTCGCTCTTCAACCCCCCGAACAATTCCGCGGAGTACTTCTCCGCGGTGGACGAGATCATCCACTGGATGGAGCAGTTATCGATCGCGCCGCCGTCCTCCGCCGCGGGGCGCACCGGGCAGGTCATCGCATACCGTGCGGAAAACGCGATTCAGCTAGCGATGTCGCGGTTGGAGGAGGAACTGCGGCACGTGCTGATTGGCAACACGGTCCCACTAGACGCCGTAAGCCGCTACGGCTCGATCAGGAGGGTTTCACTATCGTTTGGGTCGCACGACGGCGCCATCGATGATACCCTGGAGAGCTTCGGCGAGGTTGGTTCGAGCCGCTTCCACGAGCGCGGCGCGAGCCTTGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAAGCGGTTCAGGACCTTAGGGAAATTATCGATCGCATGGTTAGGTCTGGTTACGAGAGAGAGTGCCTTCAGGTTTATAGCAGTGTCCGTCGTGATGCTTTGGATGAGTGTTTGGTTATTCTGGGTGTTGAGAGGTTGAGTATTGAAGAGGTTCAGAAAGTTGAGTGGAGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGTTGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTGTTATGCAGTTGCTGAATTTCGGCGAAGCTATTTCGATTTGTAAGCGCTCGCCGGAGAAGTTGTTTCGGATTTTGGATATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCCATGGTTTCGGACGAGTTTGTGATTGGTGAGGCCAATGGTGTGCTGAGTGGGCTTGGTGAGGCTGTCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGAATGAAACTTCCAAAAAACCAGTCATAACTGGGGATGTCCATCCCTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGACTAGTGAGGAGGATCTATATCGATTTAGAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAAGCCATGTCACCCTTGGGGCAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTTGAGGAGAAGTCGAGGCTTTATGAGGATAGTGCAATGCAGCAGGTGTTTTTAATGAATAATCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAAGTCTTGGGGGATAACTGGATTAGGAAACGCCGTGGTCAGATACGCCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTAAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCATCGAAGATGGCTTTAAAGGAGAGATTCAAGAGCTTCAATGCCTGTTTTGAAGAAATTTATAGGGTCCAGACAGCTTGGAAGGTACCGGATGATCAGCTTCGCGAGGAGCTGCGGATATCCATATCGGAAAAGGTGATTCCTGCATACCGTTCTTTTATGGGTAGGTTTAGGAGTCAGTTAGAGGGAAGGCATGCGGGGAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGCACGTAG 1995 0.5073 MATTTTTSLGSGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSNFDNRLSGISDLINGDDSKSSDEEELDRFEAAEKVILAGASLSGEPSRQSTSLFNPPNNSAEYFSAVDEIIHWMEQLSIAPPSSAAGRTGQVIAYRAENAIQLAMSRLEEELRHVLIGNTVPLDAVSRYGSIRRVSLSFGSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQKVEWRSLDEKMKNWVQAVKVVVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCVMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAVKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLETSEEDLYRFRNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSKALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFMGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04432 664 Pfam Exo70 exocyst complex subunit 288 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst3g04432 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 69 651 IPR004140 GO:0000145|GO:0006887
Spst3g04432 664 SUPERFAMILY Cullin repeat-like 74 650 IPR016159 -
Spst3g04432 664 Gene3D Exocyst complex component Exo70 92 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04432 Spst-Chr3 95891851 95893845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04432 17 663 EXO70 exocyst subunit family AT5G50380 60.029 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04432 K07195 - gmx:100818693 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04432 3 95891851 95893845 Spst3g04432 3 95891851 95893845 ECH