Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04428 ATGAGTCGATACTTAGTGCACGTGACTATGATGGTCATGGTTCACATACTTTGTCAACAGCGGGTGGGTAGCTTTGTTCCTGGAGCTAGTGTTTTTGGCATTGGAAATGGAACAGCAAGTGGTGGCTCACCAAAAGCTCGAGTTGCAGCCTATAAGGCGTCCATAAGTGACGGGGTTGATGTGCTTTCTCTGTCTTTGGGTTCACCGAATCACCAAGATTACTTCAAAGACGTTGTTGCCATCGGGTCCTTCCATGCAGTTGCCAATGGCATAGTAGTAATGGCTTCTGCAGGAAATGCAGGACCTTCTCCTGGAACTGTATCCAACGTTGGACCATGGATACTTACAGTTGCTGCAAGCACTACTGATAGAGACTTCGCTAGTTATGTTACACTTGGTGACAAGAAAATCATTAAGGGAGCTAGCCTTTCAGAGCAAAACTTACCATCTAATAAGATGTACCCATTGATTAGTTCTGTTGATGCCAAAAATATCAATGCATCGATTAAGGACGCACTTGGTTGCCAGTATGGAACTCTTGATCCTGAGAAGGCTGAGGGGAAAATATTGGTCTGTCTTGGTGAGGATTCAAATATGGGTGTGGAAGCTTTTAGGGTAGGCGCTGTTGGAATGATTTTGCCTAATGATAAGGGACGAAGGGATGAAATGAGACCCCGGCCCTACTTGCTTCCTGCTGCCAATGTCGGCTTTGAGAATGGCAATTACATTTATAATTACATCACCACTACCCAGTCTCCTATGGCTTATATTTCCAGAGTGAAAACAGAATTGGGTGTGAAGCCAGCTCCATATGTTGCTTCATTTTCATCAAGGGGTCCCAATGCTGTTGACCCAGCAATCCTCAAGCCTGATGTCACTGCACCAGGAGTTAACATCATAGCTGCTTATAGTGAAGCCATATCTCCCACAGGTTTAGAATCTGACAAACGAATAACTCCTTACATGGCATTCTCTGGCACTTCAATGGCATGTCCTCATGTTTCTGGCCTTGCTGAGCTGCTCAAAGCCCTTCATCCTGATTGGAGCCCAGCTGCTATTAAGTCGGCAATCATTACCTCATCAACTACAACAGATAACTATGGAAGGCCTATTCAGGATTCAGTTTCGAACGAGGCAACTCCATTTGACTATGGTGCAGGGCATATTAAACCTGACAGTGCTGCGGACCCTGGACTTGTATATGATCTGAATATTACTGATTATTTGAACTATTTGTGTGGTCATGGCTACACCAGTTCCCAGCTTAAGCTCTTCACCGATAAGCCTTATACTTGTCCAAAGTCGTTCAGTTTAGCAGACTTCAATTATCCAACGATCACAATTCCTCAGTTGGGCCCTGGACATTCTGTGAATGTTTCTCGAACTGTTACTAATGTTGGATCCCAAAGCACGTATGAAGTGCGCATCAAGGCCCCACCACAAGTTGAAGTTTCGGTTGAGCCTAGTAAGCTGAGGTTCCAGAAAAAGGGTGAGAAAAAGGAGTTCAGAGTTACATTGAACTGGAAGTCTAAAACTGAAAACACCACTGGTTTCGTCTTCGGGAGGTTGACGTGGACTGATAAGAAGCACCATGTTAGGAGTACCATTGCAGTTAATGTAACACAATAA 1629 0.4451 MSRYLVHVTMMVMVHILCQQRVGSFVPGASVFGIGNGTASGGSPKARVAAYKASISDGVDVLSLSLGSPNHQDYFKDVVAIGSFHAVANGIVVMASAGNAGPSPGTVSNVGPWILTVAASTTDRDFASYVTLGDKKIIKGASLSEQNLPSNKMYPLISSVDAKNINASIKDALGCQYGTLDPEKAEGKILVCLGEDSNMGVEAFRVGAVGMILPNDKGRRDEMRPRPYLLPAANVGFENGNYIYNYITTTQSPMAYISRVKTELGVKPAPYVASFSSRGPNAVDPAILKPDVTAPGVNIIAAYSEAISPTGLESDKRITPYMAFSGTSMACPHVSGLAELLKALHPDWSPAAIKSAIITSSTTTDNYGRPIQDSVSNEATPFDYGAGHIKPDSAADPGLVYDLNITDYLNYLCGHGYTSSQLKLFTDKPYTCPKSFSLADFNYPTITIPQLGPGHSVNVSRTVTNVGSQSTYEVRIKAPPQVEVSVEPSKLRFQKKGEKKEFRVTLNWKSKTENTTGFVFGRLTWTDKKHHVRSTIAVNVTQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04428 542 Gene3D Peptidase S8/S53 domain 22 408 IPR036852 GO:0004252|GO:0006508
Spst3g04428 542 FunFam Subtilisin-like protease SBT1.5 412 541 - -
Spst3g04428 542 Gene3D - 412 541 - -
Spst3g04428 542 CDD PA_subtilisin_like 129 257 - -
Spst3g04428 542 ProSitePatterns Serine proteases, subtilase family, serine active site. 326 336 IPR023828 -
Spst3g04428 542 FunFam subtilisin-like protease SBT1.5 123 264 - -
Spst3g04428 542 Pfam Fibronectin type-III domain 440 538 IPR041469 -
Spst3g04428 542 Gene3D - 123 264 - -
Spst3g04428 542 SUPERFAMILY Subtilisin-like 33 399 IPR036852 GO:0004252|GO:0006508
Spst3g04428 542 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 538 IPR045051 -
Spst3g04428 542 Pfam Subtilase family 22 372 IPR000209 GO:0006508|GO:0008236
Spst3g04428 542 ProSiteProfiles Serine proteases, subtilase domain profile. 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04428 Spst-Chr3 95818249 95820483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04428 23 541 Subtilisin-like Serine Gene Family AT5G59810 51.471 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04428 - - vun:114175516 797.734