Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04413 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGCCACAGATTGAGGAGCGAAGCACCAGCACAGTTTCAAGCCTGCCATTTCCAGCGACCCTCCATGAGCACGCAGAGATTGGATTTGCCATGTTCCACTTTCACTCGCAAAGACAGCTCTTCACGTTCGCAGCCCCTCAGGCCAGTGGGGCTTTCAGTGGAGAAACCAATAGAAGCCAAGAGCAGCACATGTTCTCTCAAGCACAACATTCGTCTACCACCTTTGGCCATCACAGCAGCAGCACCACCACCATTGGTGGAAGAGTCCATCAAGGACAAGAGTTTGAAAAGGCTCGCGGAGCACGATGACTACTTCACCAACGTAGCCAAGAGGAAAAAGGGTAGCACTGAGAGCGACAGTTCTGGTGATAACTTTTGGTTTCAGCCTGGTGTTGAGGGTCACACTTTAGGAGGGCTTAACACTTCACTTGCTTTCTCCTCAGAGGAAGAGAGGGTTTGTTTTGTTCCTTCCGGACTGGTGTCTCATTCGGCACCTTTTCCCTTAAACCCTTGGCTGGAATCATGTGTAACAAAGATCACCAACTTCGGTGAGGGTAGCCACCGTCCTCACCAGCATCACAGCGACCATCCAACAGAAGGTTCAATCTCCAACGCTTCTTCAGAGAGCCAAAGCCAGCGGCTAAACGAGAACGCGTCAGAACATGAAGTGGGCAACGGTTCAGGGAATCCTTACCATCACCACGAGGTGGAGACAGGGGAAGAAGACGATCATCACGGGTTAGAACTCGTTAGCTTGCTCACTGGCTGCGTCGATGCCATTGGATCAAGAAACGTCGCTGCTATAAACCAGTTCATCGCAAAACTGGGTGATCTTGCATCTCCAAAAGGAACCCCCATAAGCCGCATATGTGCTTATTTCACAGAAGCCTTGGCCATCAGAGTCACAAGGCTTTGGCCTCATGTTTTTCACATCACCGCCAATTCCCGAGACATGGTGGATGATGATGAAACCGGAACTACATTGAGGCTTCTCAACCAGGTGACCCCAATCCCCAAGTTCATCCATTTCACATCGAACGAGATGCTGTTGAGGGCGTTTGAAGGAAAAGACAGGGTTCACATAATAGACTTTGACATCAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGCCTAGCATCGAGAGCAAATCCTCCGAGTCACGTGAGAATAACGGGGATAGGAGAGTCAAAGCAAGAGCTAAACGAAACCGGAGACAGACTCGCGGGTTTCGCCGAAGCACTTAACCTCCCCTTCGAGTTCCACCCCGTCGTGGACAGACTGGAAGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCACGAAACGGTGGCTGTGAACTGCGTTTTGCAGCTGCACAAGACGCTTTACGACGGAAGCGGAGGAGCTTTGAGGGACTTCTTGGGGCTTATCCGCAGCACCAATCCCAGCGTGGTTGTGGTGGCTGAACAAGAAGCAGAACACAACGAGGCAAGGTTAGAAGCAAGGGTGTGCAACTCGTTGAAGTATTACTCAGCATTGTTTGATTGTATCGATGAGAGTGGGGTTGCACAAGAGAGTGCAGTGAGGCTGAAGATAGAGGAGATGTACGGTAGGGAGATAAGGAACATAGTGGCATGTGAGGGGAGGGAGAGGTTGGAGAGGCACGAGGGTTTTGGAAAGTGGAGGAGGATGCTGGTGGAGCAAGGAGGGTTGAGATGTTTGGGAGTTTCTGAAAGGGAAATGAGTCAGAGTCAGTTGCTGTTGAAGATGTACTGTTGTGAGAGTTACAATGTGAAGAAGCAGGAGAAGGAAGGAGCAACAGCGGTTACTCTCAGTTGGCTTGACCAACCATTGTATACTGTCTCAGCTTGGGTGCCTGTTGATGTTGCTGGTACCTCCTCCTCTTTTTCTCACCCAACTTGA 1944 0.5062 MLAGCSSSTLLSPSHRLRSEAPAQFQACHFQRPSMSTQRLDLPCSTFTRKDSSSRSQPLRPVGLSVEKPIEAKSSTCSLKHNIRLPPLAITAAAPPPLVEESIKDKSLKRLAEHDDYFTNVAKRKKGSTESDSSGDNFWFQPGVEGHTLGGLNTSLAFSSEEERVCFVPSGLVSHSAPFPLNPWLESCVTKITNFGEGSHRPHQHHSDHPTEGSISNASSESQSQRLNENASEHEVGNGSGNPYHHHEVETGEEDDHHGLELVSLLTGCVDAIGSRNVAAINQFIAKLGDLASPKGTPISRICAYFTEALAIRVTRLWPHVFHITANSRDMVDDDETGTTLRLLNQVTPIPKFIHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSVVVVAEQEAEHNEARLEARVCNSLKYYSALFDCIDESGVAQESAVRLKIEEMYGREIRNIVACEGRERLERHEGFGKWRRMLVEQGGLRCLGVSEREMSQSQLLLKMYCCESYNVKKQEKEGATAVTLSWLDQPLYTVSAWVPVDVAGTSSSFSHPT 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04413 647 ProSiteProfiles GRAS family profile. 253 632 IPR005202 -
Spst3g04413 647 MobiDBLite consensus disorder prediction 196 256 - -
Spst3g04413 647 Pfam GRAS domain family 262 631 IPR005202 -
Spst3g04413 647 MobiDBLite consensus disorder prediction 211 237 - -
Spst3g04413 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 219 628 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04413 Spst-Chr3 95678604 95680547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04413 1 632 GRAS Transcription Factor Family AT1G63100 55.620 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst3g04413 GRAS 1.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04413 - - gmx:100786173 1022.31