Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04385 ATGCCACAGACTATTATGAGCTCTGAGGAACAACCACGAATGGTTTATTCATACAGGAACGTTATGAGGGGTTTTGCTGCAAGACTCACAGAAGAGCAGCTTAAATCAGTGGAAAAGAAGAACGGCTTTATCTCTGCTCACCCCGAAAGGATGCTGCATCGTCAAACCACCCATACCCCACAATTTTTGGGGTTGCAGCAACAAACCGGATTTTGGAAGGAATCAAACTTTGGAAAAGGAGTAATTGTTGGGGTGCTGGATTCTGGAATCACGCCTGACCATCCATCATTCAGTGATGCAGGAATGGCACCACCACCACCCAAATGGAAAGGGAGATGCGAGCTTAATGGGACAGTCTGTAACAACAAACTAATTGGAGCAAGGTCTTTCAACCTCGCTGCAGGGGCAACCAAAGAAACAGTGGCACCAATTGATGAGGATGGACATGGGACTCACACAGCGAGCACAGCAGCTGGTGCTTTTGTTCCTTATGCAGAAGTACTAGGAAATGCCAGAGGCACAGCAGCAGGGATTGCCCCTCATGCTCACCTGGCAATTTACAGAGTATGTTTTGGAGAAGACTGCCCTGAGAGTGATATATTGGCTGCATTGGATGCAGCTGTGGACGATGGTGTGGATGTAATATCAATATCCCTTGGCCTAAGTGAGCCACCTCCTTTTTTCAATGATAGCACAGCAATAGGAACATTTGCAGTAATGCAGAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTCTGGTCCTGTCCATGGCTCCTTAGTTAATGGAGCCCCTTGGATCCTCACAGTAGGAGCAAGCAATATTGACAGAAGCATTGTAGCAACAGCAAAGCTAGGAAATGGGCAAGAATTTGATGGGGAATCTGTTTTCCAGCCTTCAGACTTTTCTCCAACACAGCTATCCCTAATATATGCTGGAAAGAATGGCAAACAAGTAGCTGCATTTTGTGCTAATGGATCCTTGAATGATATTGATTTTAGAGGCAAGGTTGTATTGTGTGAGAGAGGAGGGGGAATAGGAAGAATTGCCAAAGGAGAGGAAGTTAAAAGAGCAGGTGGAACAGCCATGATTCTCATCAATGATGAAAGCAATGGTTTCAGTCTCTCAGCTGATGTACATGTTCTACCTGCAACACATATAAGCTATGAAGCTGGACTTCAGGTTAAAGCCTATATAAACTCCACTGCAACACCTACAGCTACCATTTTATTCAAAGGAACTGTAATAGGAAACTCTTTATCTCCTGCCGTTTCATCCTTCTCTTCAAGAGGTCCCAACTTGCCTAGCCCTGGTATTTTGAAACCAGACATCGTAGGACCGGGCGTGAACATCCTAGCTGCCTGGCCATTCCCCTTGAATAACAATACTGATTCAAAATCCACTTTCAACATTATGTCTGGCACATCAATGTCATGCCCACATCTTAGTGGCGTAGCTGCTTTGCTGAAAAGCACTCATCCTCACTGGTCACCAGCTGCCATAAAATCAGCCATAATGACTTCTGCAGACATACTCAACTTTGAGCAAAAACTTATTGTTGATGAAACACTTCACCCTGCAGATGTCTTTGCCACAGGTTCTGGGCACGTGAATCCATCAAGAGCAAATGACCCAGGGTTAGTTTATGATATCTCGCCTGATGATTATATACCTTACCTGTGTGGTTTAGGCTACAGCGACACAGAGGTTGGAATCATTGCACACAAAACAATTAAGTGCTCTGAGACTTCAAGCATTACCGAAGGAGAGCTCAATTATCCCTCATTTTCTGTTTTGCTCGGTTCCCCGCAAACATTCACGAGGACTGTGACAAATGTAGGTGATGCCAACTCATCTTATGAAGTCATTGTTAAGGCCCCAGAAGGGGTCAATGTGAAGGTCCAACCAAATAAACTTTACTTTTCAGAAGCAAACAAGAAAGAAAAATATTCAGTGTCATTCAGCTGTATAGAGTCCCGTAATGAAACCGTGGAATATGCTCAAGGGTTTTTAAAATGGGTCTCTGCCAAATACACTGTAAGGAGCCCTATCTTGGTCAACTTTGTATAA 2070 0.442 MPQTIMSSEEQPRMVYSYRNVMRGFAARLTEEQLKSVEKKNGFISAHPERMLHRQTTHTPQFLGLQQQTGFWKESNFGKGVIVGVLDSGITPDHPSFSDAGMAPPPPKWKGRCELNGTVCNNKLIGARSFNLAAGATKETVAPIDEDGHGTHTASTAAGAFVPYAEVLGNARGTAAGIAPHAHLAIYRVCFGEDCPESDILAALDAAVDDGVDVISISLGLSEPPPFFNDSTAIGTFAVMQKGIFVSCAAGNSGPVHGSLVNGAPWILTVGASNIDRSIVATAKLGNGQEFDGESVFQPSDFSPTQLSLIYAGKNGKQVAAFCANGSLNDIDFRGKVVLCERGGGIGRIAKGEEVKRAGGTAMILINDESNGFSLSADVHVLPATHISYEAGLQVKAYINSTATPTATILFKGTVIGNSLSPAVSSFSSRGPNLPSPGILKPDIVGPGVNILAAWPFPLNNNTDSKSTFNIMSGTSMSCPHLSGVAALLKSTHPHWSPAAIKSAIMTSADILNFEQKLIVDETLHPADVFATGSGHVNPSRANDPGLVYDISPDDYIPYLCGLGYSDTEVGIIAHKTIKCSETSSITEGELNYPSFSVLLGSPQTFTRTVTNVGDANSSYEVIVKAPEGVNVKVQPNKLYFSEANKKEKYSVSFSCIESRNETVEYAQGFLKWVSAKYTVRSPILVNFV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04385 689 ProSiteProfiles Serine proteases, subtilase domain profile. 62 543 - -
Spst3g04385 689 FunFam Subtilisin-like protease SBT1.5 80 319 - -
Spst3g04385 689 SUPERFAMILY Subtilisin-like 55 547 IPR036852 GO:0004252|GO:0006508
Spst3g04385 689 Gene3D - 276 417 - -
Spst3g04385 689 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 685 IPR045051 -
Spst3g04385 689 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 54 IPR037045 -
Spst3g04385 689 Pfam Subtilase family 78 510 IPR000209 GO:0006508|GO:0008236
Spst3g04385 689 Pfam Fibronectin type-III domain 590 686 IPR041469 -
Spst3g04385 689 PRINTS Subtilisin serine protease family (S8) signature 78 97 IPR015500 -
Spst3g04385 689 PRINTS Subtilisin serine protease family (S8) signature 473 489 IPR015500 -
Spst3g04385 689 PRINTS Subtilisin serine protease family (S8) signature 145 158 IPR015500 -
Spst3g04385 689 SUPERFAMILY PA domain 326 403 IPR046450 -
Spst3g04385 689 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 83 94 IPR023827 -
Spst3g04385 689 Gene3D Peptidase S8/S53 domain 80 556 IPR036852 GO:0004252|GO:0006508
Spst3g04385 689 Pfam Peptidase inhibitor I9 9 53 IPR010259 -
Spst3g04385 689 CDD PA_subtilisin_like 282 409 - -
Spst3g04385 689 CDD Peptidases_S8_3 52 510 IPR034197 -
Spst3g04385 689 Pfam PA domain 319 394 IPR003137 -
Spst3g04385 689 FunFam subtilisin-like protease SBT1.5 276 416 - -
Spst3g04385 689 Gene3D - 560 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04385 Spst-Chr3 95485428 95487497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04385 13 688 Subtilisin-like Serine Gene Family AT1G04110 46.469 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04385 - - gmx:100812208 1213.36