Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04379 ATGTCTCTTTGGTCAACTCTCTATCAAAACCTGTTAACCACCCAGTATTACTGCAATCAACCCACAACCACCCTTCTCGTGTTCTTCCTCATCTCCGCAGTTATTTGGTACGCATGCCTCAAACCCAAGGCCCAAAACCTACCACCCGGCCCTCCGGGCCTCCCTTTCTTCGGGAACCTTCTATCTCTTGACCCTCAGCTTCACACTTACTTCGCCAGCTTGGCCCAGATCTACGGCCCCAATTTCAAGCTCCGACTCGGGAGCAAGCTCGCCATCGTCATAACTTCACCCGCCGTGGCTCGCGAGGTTCTCAAAGACCACGACACCGTTTTCGCCAACCACGATGTCCCCGCTGCCGGCAGGGTTGCTAGCTACGGCGGCTCCGACATAGTGTGGACCCCCTACGGAGCCGAATGGCGGATGCTGAGGAAAGTGTGCGTGATGAAGATGCTGAGCAATACCACCCTGGATTCCGTTTATGATCTCCGCTGCAACGAGATGCGCAAAACGGTGTCGTACTTGCACGGTCGAGTGGGGAGCGATGTAAACGTGGGGGAGCAGGTGTTTTTGACGGTGATGAATGTGATAACCAGCATGATATGGGGCGCGGAGGTGGAAGGGGCGGAGAGGGAAACTTTGGGGGCAGAGTTCAGGGAGTTGGTGGCGGAAACAACGCAGCTTCTTGGGAAGCCCAATGTTTCGGATTTTTTTCCCGGGCTGGCCCGGTTCGATTTGCAAGGTGTGGAGAAAGAGATGCAGGTGTTGGTGTCACGGTTCGATAGGATATTTGAAAGGGTGATTGGCGAACGAGTGAAGGTGGATGGAGAAGATGAAAGAAAGGATTTTCTGCATTTTTTGTTGAAGTTGAAGGACGAAAGCAGTGATTCCAATACGCCACTTACCATCTCCCACGTGAAGGCTCTTCTCATGGATATGGTTACGGGGGGAACGGACACTTCTTCAAACACAATAGAGTTTGCAATGGCAGAAATGATGCAGAATCCAGAGATAATGAAGAGAGCCCAAGAGGAGTTGGAAGGTGTGGTTGGGAAGGATAACGTGGTAGAAGAATCTCACATTCACGAGTTGACCTACTTGCAAGCTGTGATGAAAGAAACTCTTCGACTGCACCCTGTGCTGCCACTTCTAGTACCCCATTGCCCCACTGAAACCACCAATGTTGGAGGCTACACAATTCCAAAGGGGTCTCGAGTGTTCGTTAATGTCTGGGCTATTCATAGAGATCCTTCCATTTGGGAAAAACCACTCCAATTTGACCCTACAAGGTTCTTAGATGCAAAGTGGGATTTCAGTGGCAACGACTTCAATTATTTCCCCTTCGGATCTGGAAGAAGAATTTGTGCAGGGATAGCAATGGCTGAGAGAACAGTTCTATATTTTCTTGCAACACTAATACACTTATTTGATTGGACAATACCCCACGGACAAAGCTTGGATGCATCAGAAAAATTTGGTATTGTTCTCAAAAAGAAAATACCTCTTGTTGCCATCCCCACCCCACGCTCATCCAACCCAAACCTCTATAATTGA 1551 0.4958 MSLWSTLYQNLLTTQYYCNQPTTTLLVFFLISAVIWYACLKPKAQNLPPGPPGLPFFGNLLSLDPQLHTYFASLAQIYGPNFKLRLGSKLAIVITSPAVAREVLKDHDTVFANHDVPAAGRVASYGGSDIVWTPYGAEWRMLRKVCVMKMLSNTTLDSVYDLRCNEMRKTVSYLHGRVGSDVNVGEQVFLTVMNVITSMIWGAEVEGAERETLGAEFRELVAETTQLLGKPNVSDFFPGLARFDLQGVEKEMQVLVSRFDRIFERVIGERVKVDGEDERKDFLHFLLKLKDESSDSNTPLTISHVKALLMDMVTGGTDTSSNTIEFAMAEMMQNPEIMKRAQEELEGVVGKDNVVEESHIHELTYLQAVMKETLRLHPVLPLLVPHCPTETTNVGGYTIPKGSRVFVNVWAIHRDPSIWEKPLQFDPTRFLDAKWDFSGNDFNYFPFGSGRRICAGIAMAERTVLYFLATLIHLFDWTIPHGQSLDASEKFGIVLKKKIPLVAIPTPRSSNPNLYN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04379 516 Gene3D Cytochrome P450 40 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 Pfam Cytochrome P450 48 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 CDD CYP76-like 75 505 - -
Spst3g04379 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Spst3g04379 516 FunFam Cytochrome P450 - like protein 37 502 - -
Spst3g04379 516 PANTHER OS08G0547900 PROTEIN 11 516 - -
Spst3g04379 516 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04379 516 SUPERFAMILY Cytochrome P450 48 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04379 Spst-Chr3 95446495 95448620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04379 25 515 Cytochrome P450 AT4G12300 61.290 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04379 - - gmx:100783085 817.379