Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04373 ATGGCCAAATGCCAAATGCCAAATGGTGTTTGGCAAAGTGGAGAGAGCATTGAAAAGGATGATCACACACTCATCACTACCTTGGCCTTTTCCATGGCAACCGTCCTCGCTGACCGTCATCTTCTCTTGGAAATGCAGTGTGAACCAACCTGTCTGTCAGCAACTCATAAGTTCTGGACAATTTTCACTCCACAATTGGAAATGAGTTTCCTTCATCGCCTCCTTCTGTGTATGTTGGTTGCACTTTCCAGTTCACAGCTGGTTCATGGAAATGCAGAGCTAAGAGCTCTCATGGACTTGAAAAAATCTCTGGACCCAGAGGAGACGCTCCTTGGCTCGTGGACCAGTGATGGTAATCCATGCAGTGGTTCGTTCTTGGGGGTTGCGTGCAACGAGCATAACAAAGTGGCCAATATATCATTGCCAGGAATAGGTCTTTCTGGCCGGGTCTCTCCAGCTGTGGCTGAACTCAGATGCTTGTCAGGTTTATACTTACATTTCAACCATCTCTCCGGGGACATACCCAGAGAGATTGTAAATCTTAAAGAATTGCTGGATCTCTATCTCAACGTTAATAATCTATCTGGAATCATTCCTCCTGATATCGGGAACATGACTAGCCTCCAAGTGCTGCAGTTAGGCTATAACCAGTTAGAGGGGAAAATACCTGACGTGGGTTCATTGAAGCAACTAAATGCTATTTCTTTTCAACATAACAAATTAACTGGTCCAATTCCTCTAGCCTTGGGTACCTTGGAGAAACTAAGGATGCTATATTTGAGCTTTAACAACTTCAATGGCATAATCCCTGCAAACCTAGCAGATATTGCAAGCTTGGAAGTGCTAGATATTCAAAACAATTCTCTTTCAGGGATTGTTCCTTCTGCATTTAAGAGATTAGGGGAAGGATTCCAAGGTGCAAACAACCCAGATCTCTGTGCAGTTGGGTTTTCTACTTTGAAAGCTTGCAACAATGATAAAATATTCGGCGTTGGTCAGATTAGTTCCCCAAATATATCCATAAATAGTTATCCTTCGACAACTGTCACAAATCCTGCAGATACCCACTTGCATTGTAACCAGATCCATTGCTCTAAATCAGGAAGGTTTCTTCATGTTGTCATTGCAGCAAGTGTTACAAGCACCATTATTACATTCATAAGTTCTGGAATTTTCATATTTGTCAGATACCGCCGCCAAAGGCAGAGAGTCCGGAACACATCAGATTGTTCTGAAAGCCAACTTAGTCCTTATCGGCCTAAAGAGTTCTGCATAAGTTCATCTCCACTTGTTAATCTCGAGTATTATTATAATGGTTGGGATTCGCTGGCTGATGGTCAAAATACAAGTGGATTATCCCTTGAATATTTGAACCGTTTTAGATTTAATATTGATGAGATTGAATCAGCAGCACAGCACTTTTCTGAGGCCAATCTATTGGGTAAGAGCAAACTCTCAGCAGTCTACAAAGGAGTTCATAGAGACGGTTCTCTTGTGGCTATTAGAAGCATTAGCGTGACTTGCTGCAAAACCGAGGAAGATGAATTTTTGAAAGGCTTGGTCCTATTAACCACTCTGAGACATGAAAATATTGTTAATATGAAAGGTTTCTGTTACTCAAGGAGTAGAGGTGAATGGTATTTTGTCTATGACTTTGCCAGCAGGGGTAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGAGTGTGTACTTGAATGGTCCAAGAGGGTTTCTATCATCAGGGGTATTGCAAAAGGTATTGGTTATTTGCACAGCAATGAAGCAAGCAAGCCTACAATAGTACACCAAAACATTTCAGTTGAAAAGGTTATTCTAGACCATCAATTTAACCCCTTGATCATGGATGCTGGCCTCCCTAAGATTCTTGCAGAGGATGTAGTTTTCTCAGCTCTTAAAGCAAGTGCTGCCCTGGGATACCTAGCACCAGAATATATTACTACTGGACGCTTCACTGAGAAGAGTGATATATATGCATTTGGGGTTATTGTCCTTCAACTTCTGTCTGGAAAGGCATTGATAGGGGGTTCAATCCGGGTGGCTGTTGAAGCTTTCAAATTTGAAGATTTTGTTGACACAAATCTGAAGGGAGATTATTCTAAATCTGAAGCTGCAATTCTTTCAAAGCTTGCAATTGCGTGCACCCATGAAATGCCAGAGCAAAGGCCAACCATGGTGGAGGTGATTGAAGAGCTTACCATGCTTCCTGTTCATTCTTCATGA 2244 0.4193 MAKCQMPNGVWQSGESIEKDDHTLITTLAFSMATVLADRHLLLEMQCEPTCLSATHKFWTIFTPQLEMSFLHRLLLCMLVALSSSQLVHGNAELRALMDLKKSLDPEETLLGSWTSDGNPCSGSFLGVACNEHNKVANISLPGIGLSGRVSPAVAELRCLSGLYLHFNHLSGDIPREIVNLKELLDLYLNVNNLSGIIPPDIGNMTSLQVLQLGYNQLEGKIPDVGSLKQLNAISFQHNKLTGPIPLALGTLEKLRMLYLSFNNFNGIIPANLADIASLEVLDIQNNSLSGIVPSAFKRLGEGFQGANNPDLCAVGFSTLKACNNDKIFGVGQISSPNISINSYPSTTVTNPADTHLHCNQIHCSKSGRFLHVVIAASVTSTIITFISSGIFIFVRYRRQRQRVRNTSDCSESQLSPYRPKEFCISSSPLVNLEYYYNGWDSLADGQNTSGLSLEYLNRFRFNIDEIESAAQHFSEANLLGKSKLSAVYKGVHRDGSLVAIRSISVTCCKTEEDEFLKGLVLLTTLRHENIVNMKGFCYSRSRGEWYFVYDFASRGNLSQYLDKEDGSECVLEWSKRVSIIRGIAKGIGYLHSNEASKPTIVHQNISVEKVILDHQFNPLIMDAGLPKILAEDVVFSALKASAALGYLAPEYITTGRFTEKSDIYAFGVIVLQLLSGKALIGGSIRVAVEAFKFEDFVDTNLKGDYSKSEAAILSKLAIACTHEMPEQRPTMVEVIEELTMLPVHSS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04373 747 Pfam Leucine rich repeat N-terminal domain 91 131 IPR013210 -
Spst3g04373 747 Pfam Protein tyrosine and serine/threonine kinase 478 739 IPR001245 GO:0004672|GO:0006468
Spst3g04373 747 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 147 740 - -
Spst3g04373 747 FunFam Protein NSP-INTERACTING KINASE 2 445 552 - -
Spst3g04373 747 Gene3D Ribonuclease Inhibitor 90 227 IPR032675 -
Spst3g04373 747 Pfam Leucine rich repeat 254 300 IPR001611 GO:0005515
Spst3g04373 747 SUPERFAMILY Protein kinase-like (PK-like) 448 742 IPR011009 -
Spst3g04373 747 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Spst3g04373 747 FunFam Protein NSP-INTERACTING KINASE 2 90 238 - -
Spst3g04373 747 SUPERFAMILY L domain-like 93 298 - -
Spst3g04373 747 FunFam Protein NSP-INTERACTING KINASE 2 553 743 - -
Spst3g04373 747 ProSiteProfiles Protein kinase domain profile. 474 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04373 747 SMART LRR_typ_2 157 181 IPR003591 -
Spst3g04373 747 SMART LRR_typ_2 276 299 IPR003591 -
Spst3g04373 747 SMART LRR_typ_2 252 275 IPR003591 -
Spst3g04373 747 SMART LRR_typ_2 205 229 IPR003591 -
Spst3g04373 747 Gene3D Ribonuclease Inhibitor 228 323 IPR032675 -
Spst3g04373 747 Gene3D Phosphorylase Kinase; domain 1 441 552 - -
Spst3g04373 747 Gene3D Transferase(Phosphotransferase) domain 1 554 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04373 Spst-Chr3 95403395 95407026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04373 74 587 Miscellaneous Gene Families AT4G22730 53.333 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Spst3g04373 PK_Tyr_Ser-Thr 4.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04373 - - gmx:100784155 1076.62