Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04359 ATGGAGTCCAGTGGCGGCGTTACGGTGGTGGGATCGGATGCTCCGTCGGATTACCATGTAGCTCCGAGGACCGACAACCCAGCTCCAGCAATCGGATCCACGACGCAGATTCCGGTGACGACGGGAAGTGCTCCGCCGCCAAATCCGCCACATACGGCGGCGATGGAGGCGTCGCCGGCGTCGCTGCCGGCTAAGAAGAAGAGGGGCCGGCCGAGAAAGTACGCACCGGACGGGTCGGTGACCCTGGCGTTGTCTCCGAAGCCGATATCTTCCTCCGCTCCGTTGCCGCCGGTGATCGATTTCTCGTCGGAGAAGCGCGGAAAAATTAAACCAACTAGTTCCCTGAGCAAAGCCAAATTTGAGTTGGAGAATTTAGGTGAATGGGTGGCATGCTCAGTTGGTGCTAATTTCACTCCCCATATCATCACTGTTAATTCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCTCGAGCTATATGCATTCTTTCAGCTAATGGTGTCATATCAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGGACGGTTTGAAATTTTGTCTTTATCTGGCTCATTCATGCCCAATGAAAGTGGAGGAACACGAAGCAGATCCGGTGGCATGAGTGTATCTTTGGCAAGCCCTGATGGACGTGTTGTGGGTGGGGGAGTAGCTGGTTTATTGGTGGCTGCAAGTCCTGTGCAGGTAGTGGTAGGAAGTTTTCTAGCAGGAAACCAACATGAACAGAAGCCAAGAAAACAGAAACATGAAGTTATATCAAGTGTGGCACCAGCTGCAATTGTTCCCATCTCCACTCTTGATCCAATACCAATTCTATCATCAGCGACTTCCATCCGTGGAGAAAGTTGGTCTGCTACGCCAGCAGAGGCCAAGAGTAAGCCAGCTGACATTAACGTGTCGCTTCCAGCAGGGTAA 969 0.5191 MESSGGVTVVGSDAPSDYHVAPRTDNPAPAIGSTTQIPVTTGSAPPPNPPHTAAMEASPASLPAKKKRGRPRKYAPDGSVTLALSPKPISSSAPLPPVIDFSSEKRGKIKPTSSLSKAKFELENLGEWVACSVGANFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKQKHEVISSVAPAAIVPISTLDPIPILSSATSIRGESWSATPAEAKSKPADINVSLPAG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04359 322 CDD DUF296 138 229 IPR005175 -
Spst3g04359 322 FunFam AT-hook motif nuclear-localized protein 1-like 139 269 - -
Spst3g04359 322 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Spst3g04359 322 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 255 - -
Spst3g04359 322 ProSiteProfiles PPC domain profile profile. 134 273 IPR005175 -
Spst3g04359 322 MobiDBLite consensus disorder prediction 298 322 - -
Spst3g04359 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 275 IPR039605 GO:0003680
Spst3g04359 322 Gene3D - 139 271 - -
Spst3g04359 322 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04359 Spst-Chr3 95233553 95237478 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04359 3 319 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.757 1.33e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04359 - - gmx:100794202 565.459