Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04343 ATGGCAACAAAACTACTATGTCTTTCCCTGCTGGTTCTAAATCTCGTCCTTCACATGCCTGACATCGCAGAATCCGCAACTATCAACCGATCCAACCCAAACCCGACAGCAGACTTCATAAAGTCCTCATGCAAGGCCACGCGCTACCCCGTCGTGTGCGTTCAAAGCCTCTCAGGCTACGCCAGCAAGATTGGGCGGAGCGAGCAAGAACTAGCCATGGCTGCCCTGACCGTGAGCGTGTCCAAGACTCGTTCATGCACATCGTTTCTTAAAAAGATGGTGACGGAGAAGGGAATGAAAGGAAAAGTGTACAATGCAGTGCGAGATTGCATAGAGAACATGGATGATGGCGTGGACCGTCTTAGCCAATCGGAGAAGGAGCTCGGGCTCGTGGGCAAGCCCAAGGGGAAGGATTTCCTGTGGCATATGAGTAATATCCAGACTTGGGTTAGTGCTGCTATAACTGATCAGGCCACGTGTCTTGACGGCTTTGATGGGTCCCGTCTTGATGCTAATTTGAAAGCTGCCATTAGGTCTAGGGTTGTGGCCGCTTCTCAAGTCACCAGTAATGCTCTTGCGTTGGTTAATCGCTTTGCCTCCAAGTACCGCACTCAAACGCCATAA 624 0.5096 MATKLLCLSLLVLNLVLHMPDIAESATINRSNPNPTADFIKSSCKATRYPVVCVQSLSGYASKIGRSEQELAMAALTVSVSKTRSCTSFLKKMVTEKGMKGKVYNAVRDCIENMDDGVDRLSQSEKELGLVGKPKGKDFLWHMSNIQTWVSAAITDQATCLDGFDGSRLDANLKAAIRSRVVAASQVTSNALALVNRFASKYRTQTP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04343 207 NCBIfam pectinesterase inhibitor domain 8 196 IPR006501 GO:0004857
Spst3g04343 207 FunFam Pectin methylesterase inhibitor 1 35 198 - -
Spst3g04343 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 199 IPR035513 -
Spst3g04343 207 CDD PMEI-like_3 42 200 - -
Spst3g04343 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 198 IPR035513 -
Spst3g04343 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 194 - -
Spst3g04343 207 SMART PMEI_2 35 194 IPR006501 GO:0004857
Spst3g04343 207 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04343 Spst-Chr3 95074792 95075415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04343 40 195 Carbohydrate Esterase AT3G14310 28.662 1.11e-19 84.7