Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04340 ATGATCAGAAAGTCACAGAAGAACCCCATGTGTGTAATCTTCAAATTGGTGCGGTGTTTTGGACAAGGAACCAATAAATTTTGTTTACCAAAGTTGGAACCCAAGTATGTTCAGTTCGGCCACGGCCCAATAGATCTACCAAAGGGACATTTGACGGTGTGTGTAGGCGAATCCGAAGATGAGAAGCAACGTGTTTTGGTGCCAGTTACTCACTTCAATCACCCCCTCATCGGAAAGTTATTGGAGGACGCAGAGAAAGTTTACGGGTTCGATCATCCAGGTGTAATAACCATACCCTGCAGAGTCTCCGAGTTCCAGAGAGTTCAGAATATTATTGCCACCACCCCAAGCTACCACAGACGCCTCAAAAATTGTTGTTCCATCAAGTCAAGTGTTAATTAA 402 0.4428 MIRKSQKNPMCVIFKLVRCFGQGTNKFCLPKLEPKYVQFGHGPIDLPKGHLTVCVGESEDEKQRVLVPVTHFNHPLIGKLLEDAEKVYGFDHPGVITIPCRVSEFQRVQNIIATTPSYHRRLKNCCSIKSSVN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04340 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 107 IPR003676 GO:0009733
Spst3g04340 133 Pfam Auxin responsive protein 45 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04340 Spst-Chr3 95036657 95037058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04340 43 116 Calmodulin-binding Proteins AT3G43120 44.595 3.04e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04340 K14488 - gmx:102668727 204.142