Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04295 ATGCCAAATCTTGCACCAGGTCTCATCTTCATCATCGCATGGATTTTTCGGATGGAAAAAGTGAACTCAAGCTGCACATATAGTAGAATAAAAATTGTTGGCACATTTCTTTGTGTCTCTGGGGCTCTCACATTGAGCATAATGCAAAGCATCTCTGCACCTAAGTTCACTAAAGAGGGCACACTTCAATCACCATCTCCACCACCGAATTTGACGTTTGACAGGGACAAGTTAAGCGGTTGTCTCTATCTCATGGCCGCAGTCCTCATATTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTGGGAGATTTTCCTGCACCGATGTCGTTGAGTGCAATAACTTGCTTTTTCGGGACGTTTATGACTGCCGCAGTTCAATTAATTCAGGATCACGAATTCAAAACTGGTTGGCCAGTTGTGGGGATTGGAGACCTGATTGGCTATTATCTTCTGGCAGGTGTAGTGAGTGCAATATGCTCGAGTGTGAATTGTTGGGTAATTGAGAAGAGAGGACCGGTGTTTGTGTCCATGTTCAGCCCTATTGGCACAGTCTGCTCAGTCATTTTCTCAGTTGTTACTCTAGGACAGACCATGAACACTGGAAGCTTGGCGGGTATGTTCCTCATGTTCACTGGCCTCTACATTGTTCTTTGGGCCAAAGGTAAAGAAGGTGGCATAAAGAGTGAGAATGATGCAGAGAAGCCTCTCTTAAAGTTCTCCATCGAGGAGCAGGAGGACGGGAGTTTTACTCGCTTCGGAGGAACTAGATCTGGTTCTTGGTCGGAGATCGCTATAGCAGTTTATATAGGTTGGTTGCAGTTCCAGCAGACAAGGGGAACAAAAGGGAAGGACACATCTAGTGTTGTAGGCCATTCCATAATCTTGACACATGTCTCTCATGTTTGGTCTATTCCTATTGCACCGAAGGGTGGTCCCTCTGGTCCAGATATGGCAAGGTTTCCAGTGACATTAAGCATTTATGCTTTTGATGGTGATTCTTGGTACGAGTGGCTGAAAGAAGTTATAGGTAACAAGAGGTTGTTTCGCAATCAATCTGGGTTTGTTGAGGGCATCATGATCGATCAAGTGTCGTGA 1098 0.4517 MPNLAPGLIFIIAWIFRMEKVNSSCTYSRIKIVGTFLCVSGALTLSIMQSISAPKFTKEGTLQSPSPPPNLTFDRDKLSGCLYLMAAVLILSSNIVLQAFTLGDFPAPMSLSAITCFFGTFMTAAVQLIQDHEFKTGWPVVGIGDLIGYYLLAGVVSAICSSVNCWVIEKRGPVFVSMFSPIGTVCSVIFSVVTLGQTMNTGSLAGMFLMFTGLYIVLWAKGKEGGIKSENDAEKPLLKFSIEEQEDGSFTRFGGTRSGSWSEIAIAVYIGWLQFQQTRGTKGKDTSSVVGHSIILTHVSHVWSIPIAPKGGPSGPDMARFPVTLSIYAFDGDSWYEWLKEVIGNKRLFRNQSGFVEGIMIDQVS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04295 365 Pfam EamA-like transporter family 79 218 IPR000620 GO:0016020
Spst3g04295 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 222 - -
Spst3g04295 365 PANTHER WAT1-RELATED PROTEIN 1 229 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04295 Spst-Chr3 94520080 94529096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04295 1 225 Nodulin-like Gene Family AT5G47470 55.310 3.66e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04295 - - gmx:100809182 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04295 3 94520080 94529096 Spst3g04295 3 94520080 94529096 PCT