Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04263 ATGCGTATAGAGGAATTGAATGGGGTTGAGGTAGGAGAAGGTGAGGAGGAAGGAGGATTGAGGTTTGTGGGTTATGACGCGAAAAGGGTGTTGGTTGGAGCAGGTGCTCGTATGCTATTCTACCCAACCCTTTTTTACAATGTTGTCAGGAATAGGATTCAGTCTGAGTTTCGATGGTGGGATAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCGTTTCCTATTGATGTTCCACACTTGAAGGAGCTTGGTGTTCGTGGGGTCATCACATTGAATGAGTCATATGAAACTTTGGTTCCAACAACATTATATTATACTCATGGAATTAACCACTTAGTGATCCCTACCAGAGATTACTATTTTGCTCCTTCATTGCATGACATACGACGGGCTGTGAGTTTCATACATGAAAATGCATTGTCTGGACGCACTACATATGTGCATTGCAAAGCTGGACGCGGTCGCAGCACAACTGTTGTTATTTGTTATCTGGTGCACCACAAAATGATGACACCTGATGTTGCATATGATTATGTGAAATCAATTCGACCAAGGGTGCTTCTTGCTTCCTCTCAGTGGAAAATTGTCCAAGAATACTACTACCATATTATGGTGGGGAGGGCTGTTGGATGTGCTCCTACAACCAATCCATTTCCATTAGTAAAGGCTTCTCAAGGGGCAACAGGCTCACGAGATCTTGTGATGTTTGATGACAATTCTGTGGTCATGGTAAATGGGTCAGATTTAGAAGGTTACGACCCAACAAATCAATCAAGAACTGCGACAAGTGACATGTGGGCAAAATTAAGTGTTGTATATCGTGTACGAGTTGCTGGACAAGCGGCACTGGAGAGAATATCATGCCTTTTTCTACGATATGGTACTACTAGCCAGAATATTTTTATAGAGAAACCAAGCAACATGGAAAGCCCTTACTCAATCAAGGGCAATCACTTGGGAGAACTTAGTGTCGATATCCACGTCGTCTACTGA 996 0.4277 MRIEELNGVEVGEGEEEGGLRFVGYDAKRVLVGAGARMLFYPTLFYNVVRNRIQSEFRWWDKVDEFILLGAVPFPIDVPHLKELGVRGVITLNESYETLVPTTLYYTHGINHLVIPTRDYYFAPSLHDIRRAVSFIHENALSGRTTYVHCKAGRGRSTTVVICYLVHHKMMTPDVAYDYVKSIRPRVLLASSQWKIVQEYYYHIMVGRAVGCAPTTNPFPLVKASQGATGSRDLVMFDDNSVVMVNGSDLEGYDPTNQSRTATSDMWAKLSVVYRVRVAGQAALERISCLFLRYGTTSQNIFIEKPSNMESPYSIKGNHLGELSVDIHVVY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04263 331 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 292 - -
Spst3g04263 331 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Spst3g04263 331 FunFam Dual specificity phosphatase domain protein 59 206 - -
Spst3g04263 331 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 203 IPR029021 -
Spst3g04263 331 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Spst3g04263 331 Pfam Dual specificity phosphatase, catalytic domain 81 201 IPR000340 GO:0008138|GO:0016311
Spst3g04263 331 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Spst3g04263 331 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Spst3g04263 331 Gene3D Protein tyrosine phosphatase superfamily 59 206 IPR029021 -
Spst3g04263 331 CDD PTPMT1 59 201 IPR044596 GO:0004721
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04263 Spst-Chr3 94155260 94158683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04263 28 329 Protein tyrosine phosphatase (PTP) family AT2G35680 58.065 7.79e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04263 - - gmx:100790413 533.487