Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04261 ATGTACGGACAGAATAGTACCTACGAATCGGATTTGGCACTCTTGGATTCGATTCGGCGCCACTTGCTGGGCGAGTCCGAATCGATATTCGGAGCCCCTACTTGTGCATCGGGTCGAAGCTCCGGTATCGGCGTCTTGCACTCGTGTTTGAGCGACAATTGGGGCGACCTTCCGTTGAAGGAGGATGATTCCGAAGACATGGTGCTCTACGACGTGCTCCGTGACGCCGTTGACGTGGGGTGGGTCCCATCTCTTAACGCCGGCTCGCCCGATAGCGTTTCCTCGTGTCTTACGGCGGATATCTCGGTGAAGCTGGAGCCCGACGTTATGCCGGCGGTGACGAGTCCGCCTCCTCCTGCGGCGGTGGGGAAGCAGGAGAAGAAGGCTTCTCCGGCGAAGGGGAAGCACTACCGCGGCGTGCGGCAGCGGCCATGGGGGAAATTCGCGGCGGAGATTCGGGACCCGGCGAAAAACGGGGCGCGGGTTTGGCTGGGAACGTTTGAGACCGCCGAGGATGCGGCGTTGGCGTACGACCGTGCCGCCTACCGTATGCGGGGGTCGAGGGCGTTGCTGAATTTTCCGTTGAGGGTTAACTCCGGCGAGCCCGACCCGGTGAGAGTGAAGTCAAAGCGGTCGTCTTTACCGGAAAGTGGGGCGGCTCCGGCGAAGAGGAAGAAGGTGGTGGGGTCGGGGCAGGTGCAAGTGGGAGGTCAAGTGGCAGAGTGTACACGTGGCGAACAGTTATTAGTTAGCTAA 756 0.6071 MYGQNSTYESDLALLDSIRRHLLGESESIFGAPTCASGRSSGIGVLHSCLSDNWGDLPLKEDDSEDMVLYDVLRDAVDVGWVPSLNAGSPDSVSSCLTADISVKLEPDVMPAVTSPPPPAAVGKQEKKASPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVKSKRSSLPESGAAPAKRKKVVGSGQVQVGGQVAECTRGEQLLVS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04261 251 SMART rav1_2 136 200 IPR001471 GO:0003700|GO:0006355
Spst3g04261 251 FunFam Ethylene-responsive transcription factor 2 135 195 - -
Spst3g04261 251 ProSiteProfiles AP2/ERF domain profile. 136 194 IPR001471 GO:0003700|GO:0006355
Spst3g04261 251 PANTHER DNA-BINDING DOMAIN 116 210 IPR044808 GO:0003700|GO:0009873
Spst3g04261 251 Pfam AP2 domain 136 186 IPR001471 GO:0003700|GO:0006355
Spst3g04261 251 MobiDBLite consensus disorder prediction 202 233 - -
Spst3g04261 251 CDD AP2 135 194 IPR001471 GO:0003700|GO:0006355
Spst3g04261 251 SUPERFAMILY DNA-binding domain 136 196 IPR016177 GO:0003677
Spst3g04261 251 Gene3D AP2/ERF domain 135 197 IPR036955 GO:0003700|GO:0006355
Spst3g04261 251 PRINTS Ethylene responsive element binding protein signature 137 148 IPR001471 GO:0003700|GO:0006355
Spst3g04261 251 PRINTS Ethylene responsive element binding protein signature 160 176 IPR001471 GO:0003700|GO:0006355
Spst3g04261 251 MobiDBLite consensus disorder prediction 114 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04261 Spst-Chr3 94135046 94135801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04261 9 250 AP2-EREBP Transcription Factor Family AT4G17500 53.875 2.57e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst3g04261 AP2 9.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04261 K09286 - gmx:100803653 360.147