Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04228 ATGATAACAACTGCATATTTCAATTTTCCTTACAAGACCGCGGTATCTCGGTCGATTGCGGGCACCACCGTGCGCATTCTTCTCGATGGTGGCAGCTTCGACAACTTCATTCGAGATGGAGAAGATTCGAAAAGGAAATCTCAATCCAATCGTTGGGTGGGTGTAGCTTTTGGGAGGGTTGACATGGAGGAACGGTATGAGCCATTGAAGGAGCTTGGTTCTGGGAATTTTGGTGTGGCCAGGTTGGCCAAAGACAAGAAGACTGGAGAGCTTGTCGCGGTCAAATACATAGAAAGGGGTAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAACCACCGATCATTAAGGCATCCAAATATAATCAGGTTCAAAGAGGTCTTGCTGACCCCTACACATTTAGCTATTGTCTTGGAGTATGCTTCAGGTGGTGAACTTTTTGAGAGGATATGTACTGCTGGCCGATTTAGCGAAGATGAGGCAAGATATTTCTTCCAGCAGCTAATATCCGGGGTTAGCTACTGTCATTCAATGGAGATCTGTCATAGAGATCTGAAATTGGAAAACACTCTCTTGGACGGAAATCCATCTCCTCGACTTAAAATTTGTGACTTCGGTTACTCCAAGTCTGCTCTATTGCACTCTCAACCAAAATCAACAGTTGGAACACCTGCATACATTGCTCCAGAGGTTCTGTCTCGAAAGGAGTACGATGGAAAGATTTCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGAGCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATTGGTGTTCAGTACTCCATACCCGACTATGTTCGTGTTTCTACTGAGTGTAGGAATCTTCTATCTCGCATTTTTGTTGCCGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGAATCCTTGGTTTCTGAAGAATTTGCCTAAAGAGATTATCGAAGCAGAAAGAAAAGGATTTGAGGAAACAAAGAAAGACCAACCATGCCAAAAGGTGGAAGAAATCATGAAGATCATACAAGAGGCAAGGGTACCAGGACAAGGATCCAAAGCTGGTGATGGTATTGGTGGGCAAGGTGGTGCTGGATCATTAGATATTGAGGATGATGAGGAAATTGATGTTAGTGGTGAATATGAACATGTGTGA 1200 0.4317 MITTAYFNFPYKTAVSRSIAGTTVRILLDGGSFDNFIRDGEDSKRKSQSNRWVGVAFGRVDMEERYEPLKELGSGNFGVARLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEEPEDPRNFRKTIGRIIGVQYSIPDYVRVSTECRNLLSRIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGFEETKKDQPCQKVEEIMKIIQEARVPGQGSKAGDGIGGQGGAGSLDIEDDEEIDVSGEYEHV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04228 399 FunFam Serine/threonine-protein kinase SRK2E 142 330 - -
Spst3g04228 399 PANTHER SERINE/THREONINE KINASE 64 343 - -
Spst3g04228 399 Gene3D Phosphorylase Kinase; domain 1 49 141 - -
Spst3g04228 399 MobiDBLite consensus disorder prediction 361 399 - -
Spst3g04228 399 SUPERFAMILY Protein kinase-like (PK-like) 64 328 IPR011009 -
Spst3g04228 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Spst3g04228 399 ProSiteProfiles Protein kinase domain profile. 66 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04228 399 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Spst3g04228 399 SMART serkin_6 66 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04228 399 FunFam Serine/threonine-protein kinase SRK2E 62 141 - -
Spst3g04228 399 CDD STKc_SnRK2 65 321 - -
Spst3g04228 399 Pfam Protein kinase domain 66 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04228 399 Gene3D Transferase(Phosphotransferase) domain 1 142 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04228 Spst-Chr3 93687328 93695706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04228 65 340 CBL-interacting serine-threonine protein kinases AT4G24400 42.807 3.89e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst3g04228 Pkinase 3.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04228 K14498 - gmx:100782714 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04228 3 93687328 93695706 Spst3g04228 3 93687328 93695706 PCT